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Protein Alignment TpnC47D and Calml3
DIOPT Version :9
Sequence 1: | NP_001286310.1 |
Gene: | TpnC47D / 36195 |
FlyBaseID: | FBgn0010423 |
Length: | 155 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001012054.1 |
Gene: | Calml3 / 307100 |
RGDID: | 1305499 |
Length: | 149 |
Species: | Rattus norvegicus |
Alignment Length: | 148 |
Identity: | 52/148 - (35%) |
Similarity: | 99/148 - (66%) |
Gaps: | 3/148 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 LTPEQIAVLQKAFNSFDHQKTGSIPTEMVADILRLMGQPFDRQILDELIDEVDEDKSGRLEFEEF 72
||.||||..::||:.||....|.|.|:.:..::|.:||......|.::::|:|:|.:|.::|.||
Rat 5 LTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEF 69
Fly 73 VQLAAKFIVEEDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDIMIEEIDS 137
:.:.::.:.:.|.| :|:|||||::||.|||::..:.|:.::..|.::|:::|:|.||:..|:
Rat 70 LTMMSRKMKDTDSE---EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADT 131
Fly 138 DGSGTVDFDEFMEMMTGE 155
||.|.|:::||:.|:..:
Rat 132 DGDGQVNYEEFVHMLVSK 149
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
TpnC47D | NP_001286310.1 |
FRQ1 |
8..155 |
CDD:227455 |
52/146 (36%) |
Calml3 | NP_001012054.1 |
PTZ00184 |
1..149 |
CDD:185504 |
52/146 (36%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23050 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 3.010 |
|
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