DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and Phf24

DIOPT Version :9

Sequence 1:NP_001286310.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_006537872.1 Gene:Phf24 / 230085 MGIID:2140712 Length:431 Species:Mus musculus


Alignment Length:139 Identity:31/139 - (22%)
Similarity:50/139 - (35%) Gaps:47/139 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LMGQPFDRQILDELIDEVD------EDKSGRLEFEEFVQLAAKFIVEEDDEAMQKELREAFRLY- 99
            ::||...|..|.|..|:.|      :|..|              :..||.|.....|....|.. 
Mouse     1 MLGQKALRYFLLEYEDDDDGGDDDGDDDGG--------------LFTEDSEYHTPWLLPGERRLE 51

  Fly   100 -DKQGNG---YIPTS-----------CLKEILKELDDQLTEQELDIMIEEIDS----------DG 139
             |.|..|   :||.:           |||::.:|:.::...:....:::|..|          ||
Mouse    52 TDSQDTGWRNWIPKATGRGEQLDHLGCLKDLPREVQEEKEAEASAPVVQEESSINRAAWERLRDG 116

  Fly   140 SGTVDFDEF 148
            .| |:.:||
Mouse   117 RG-VEPEEF 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_001286310.1 FRQ1 8..155 CDD:227455 31/139 (22%)
Phf24XP_006537872.1 Zf_RING 157..229 CDD:374771
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838651
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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