DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TpnC47D and E02A10.3

DIOPT Version :10

Sequence 1:NP_476968.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_001343832.1 Gene:E02A10.3 / 179722 WormBaseID:WBGene00008453 Length:283 Species:Caenorhabditis elegans


Alignment Length:241 Identity:51/241 - (21%)
Similarity:86/241 - (35%) Gaps:57/241 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GGGYYYRPTSLQLTQTQMNGGPPPFQRQLTPPCLSPTGKLPTSPRRSCLVVRPGDDATTPEESEP 110
            ||..|...||:.             :|....|  :.|.|.|.|.::..||   ||....|..|:.
 Worm   183 GGKIYCPKTSVT-------------ERDFQNP--TSTFKKPDSVKQVDLV---GDLWVAPNNSKM 229

  Fly   111 PHAAMKLLTIGEEDTGC-APGAGRHK-------KKVVFADDHGGQLTQVRVMREPSYMPPIWSLQ 167
            ...:.. ||:.:..|.. ..|.|..:       |.|.........:|...:..:|..:.|     
 Worm   230 TTFSFN-LTVNDLKTHFPVNGDGEFEILTGIIWKCVATVRGESAPVTITVIRSDPKKLKP----- 288

  Fly   168 FLAHVTQG-MISPVPQEQWVVDF-VQPAS--DYVRFRQKLDERNVSLENVIIKETEQLIVGTVKV 228
              ..|..| |||.:.     ||| |..||  :.|:...:..:..|.::.::...::.::.|.   
 Worm   289 --RAVRNGQMISSIH-----VDFSVAEASLEEIVKSIGEAKDERVVIDEIVDDVSDFIVYGA--- 343

  Fly   229 KNLSYHKEVIIRSSCDSW------KTHEDTFCTYSVVGNGAASAYL 268
             ||::    :..|..|.:      |:.|..:|....:|:..|...|
 Worm   344 -NLTF----VDMSEVDFYEAKVMGKSPESVYCNVQGIGDDGAVVVL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_476968.1 PTZ00184 6..153 CDD:185504 25/114 (22%)
E02A10.3NP_001343832.1 PTZ00184 132..273 CDD:185504 24/108 (22%)

Return to query results.
Submit another query.