DRSC/TRiP Functional Genomics Resources

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Protein Alignment TpnC47D and Calb1

DIOPT Version :9

Sequence 1:NP_001286310.1 Gene:TpnC47D / 36195 FlyBaseID:FBgn0010423 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_033918.1 Gene:Calb1 / 12307 MGIID:88248 Length:261 Species:Mus musculus


Alignment Length:125 Identity:40/125 - (32%)
Similarity:63/125 - (50%) Gaps:13/125 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KAFNSFDHQKTGSIPTE----MVADILRLMGQPFDRQILDELIDEV----DEDKSGRLEFEEFVQ 74
            |.:..:|...:|.|.||    .:.|:|....:..|...|.|..|.:    |.:..|:||..|..:
Mouse   105 KTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMAR 169

  Fly    75 L---AAKFIVE-EDDEAMQKELREAFRLYDKQGNGYIPTSCLKEILKELDDQLTEQELDI 130
            |   ...|::: :..:...||..:||.|||:.|||||..:.|..:||:|.:: .:|||||
Mouse   170 LLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEK-NKQELDI 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TpnC47DNP_001286310.1 FRQ1 8..155 CDD:227455 40/125 (32%)
Calb1NP_033918.1 Interaction with RANBP9. /evidence=ECO:0000250|UniProtKB:P05937 2..7
EFh_HEF 16..259 CDD:329015 40/125 (32%)
EF-hand motif 16..44 CDD:320075
EF-hand motif 57..86 CDD:320075
EF-hand motif 102..131 CDD:320075 7/25 (28%)
EF-hand motif 146..175 CDD:320075 7/28 (25%)
EF-hand motif 190..219 CDD:320075 14/28 (50%)
EF-hand motif 234..259 CDD:320075
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5029
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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