DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr47Ef and AT4G01985

DIOPT Version :9

Sequence 1:NP_610660.2 Gene:Cpr47Ef / 36194 FlyBaseID:FBgn0033603 Length:612 Species:Drosophila melanogaster
Sequence 2:NP_974499.1 Gene:AT4G01985 / 2745601 AraportID:AT4G01985 Length:579 Species:Arabidopsis thaliana


Alignment Length:623 Identity:269/623 - (43%)
Similarity:279/623 - (44%) Gaps:172/623 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 SAASAGGSPGAGLQGPGGGFGGGGGFGGGGAGGGYGGGGGGGPAGGFGGGPGGGGAG----GFGG 90
            :.|..|.|.|.|:.|.|||.||.||.||.|||||.|||.||...||..||.||||.|    |.||
plant    51 AGAGGGASGGIGVGGGGGGGGGIGGSGGVGAGGGVGGGAGGAIGGGASGGAGGGGKGRGRKGGGG 115

  Fly    91 GNNGLGGFANGRPIAPGGGGGGGGAPAPRPSPSGGAPPTSGPPIPILSFVNENDGDGNYRFSYET 155
            ...|:||       ..|.|||.||        |.||                             
plant   116 AGGGVGG-------GVGAGGGAGG--------SVGA----------------------------- 136

  Fly   156 GNGIKAQEEGTVKNKGSENEIPSVMGSYSYTNPEGELVEIMYTADENGFVPSGNALPTPPPIPEA 220
            |.||.....|.:                                                     
plant   137 GGGIGGGAGGAI----------------------------------------------------- 148

  Fly   221 IAKSLAAQGISILPGGGYSGGPGGQGAG----GGGGGGSGYGGGSGFGGG-----GAGGGSGGGG 276
                          |||.|||.||.|.|    .|||.|.|.|||.|.|||     |||||.|.||
plant   149 --------------GGGASGGVGGGGKGRGGKSGGGAGGGVGGGVGAGGGAGGSVGAGGGIGSGG 199

  Fly   277 GGAGGGGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGF 341
            ||..|.||.||||.||.||..|..|...||..||.|.|||.||:|||:..||..|..|....||.
plant   200 GGTVGAGGRGSGGASGGGGTVGAGGRGSGGASGGVGVGGGAGGSGGGSVGGGGRGSGGVGASGGA 264

  Fly   342 GGQGGAGGGYGGGGGGGRGG------GGA-PGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPGAPG 399
            ||..|||||.|||.|||.||      ||| .||.|...|||.||..||||.|.||..|||.|...
plant   265 GGNVGAGGGLGGGVGGGVGGGVGGSVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASGGAS 329

  Fly   400 SPGGGGYGGQGGAGGGYGGG-GGRGGGGAPGA-PGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPG 462
            ...||..|..||.|||.||| ||..|||..|| .||.|...|||.||..||||.|.||..|||.|
plant   330 GGAGGSVGAGGGVGGGVGGGVGGGVGGGVGGAVGGAVGGAVGGGGGGSVGGGGRGSGGASGGASG 394

  Fly   463 ------APGSPGG--GGFGGQGG-----------GGGYGGGAGRGGAPGAPGSPGGGGFGGQGGG 508
                  :.|:.||  ||.||.||           |||.|||.| ||..||.|...||..||.|||
plant   395 GASGGASGGASGGASGGVGGAGGAGGSVGAGGGVGGGVGGGVG-GGVGGAVGGAVGGAVGGGGGG 458

  Fly   509 -------GGFGAGGGRGGAGGAPGGPGSPGGPGYGGGAGG--PGGAGGRPGGPGLPGNQYVPPAA 564
                   |..|||||.||:.||.||.|..||.|.||||||  .||.||..|| |:.|  .|..|.
plant   459 SVGGGGRGSGGAGGGTGGSVGAGGGVGVGGGGGIGGGAGGGVGGGVGGGVGG-GVRG--AVGGAV 520

  Fly   565 GGGAPGSPGRPGSGGVPGTGSQYIPPAPGAPGGGRGNG 602
            |||. |..|| ||||..|...     |.|..|||.|.|
plant   521 GGGV-GGAGR-GSGGASGGAG-----AGGGAGGGVGGG 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr47EfNP_610660.2 Chitin_bind_4 149..204 CDD:278791 4/54 (7%)
AT4G01985NP_974499.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.