DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13223 and ECM27

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_012640.4 Gene:ECM27 / 853570 SGDID:S000003867 Length:725 Species:Saccharomyces cerevisiae


Alignment Length:682 Identity:115/682 - (16%)
Similarity:215/682 - (31%) Gaps:251/682 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 IYVFWMMQITIKNYFCPTLMVIAD--LLRMNESTAGVT-------------VLAIANGSPDFFTA 106
            |..|.::.|...::.||.:..|:|  .||.|.|....|             :|:..|.|||.|:.
Yeast    32 IIAFVLLGICASDFLCPNVAHISDPNSLRSNGSLVSKTASHASHTGALMAVLLSWCNSSPDLFSN 96

  Fly   107 IASRVQTSKHSFLSCMSQAMFLHIFVAGLVILT---KPFNMRANTY-----------LRDFGFLF 157
            :.|...:::.:..:.:|.::...:...|:::..   ..|.:.:.|:           :||..|..
Yeast    97 LMSWATSTRETRSTSVSLSIGEVLGACGIILCIVEGSIFIIMSRTHIEISQIQKLSIMRDLLFSL 161

  Fly   158 LNTVYMDYIHKRPKGISWLAALPSAFIFVGYVVVAI----------------------------V 194
            .....|.|:....: ::.|..|..||::..|:||.:                            :
Yeast   162 AAMCVMSYVSLMNQ-VTVLNCLLMAFLYAFYLVVKLTFKLNHSAETPDETAADTSLRENSVSPFL 225

  Fly   195 DQHLLIARIQKMEQRQLNVAEAL------------------------QLEELKPQKEM------- 228
            |..|:.:.:....|...:::.::                        .|||...:.||       
Yeast   226 DDSLMASGLLPPIQPGFDISNSITHGIKPSLLSAMDFNSFLSMLENSSLEEDDSRNEMAELNTLR 290

  Fly   229 ---PLKRQEIDRPSIGHGSRNKRIFRQFWNTVAEF-DKDRF------------------------ 265
               |.:.........|..:...|.|.:..|...|: |.:|.                        
Yeast   291 SMTPGQHWSASATVAGEATSAGRPFSEPTNAFTEYRDSERAINSSPAVFAPYRDNPDDEESQEQV 355

  Fly   266 --------HRGT------------FLVKLYL-----------------IVKQPIDMLLRILIPK- 292
                    |.|.            :::|:::                 |:..|..::.::..|: 
Yeast   356 LLETTTHGHFGAQEMRRFSKRSLGWIIKIFIPHLSNFSQKSISDAIFSIITVPFFIIFKLSCPQP 420

  Fly   293 ------VDMEAPQYGWSKL---LFNIQVVLVPTYIAYI--IVRGYSIAGLAVYMIALIL-MIPVA 345
                  .|....:|..:.|   |..||.:..|..:..|  ::..|.: |..||:..||| |..:.
Yeast   421 PSDILSYDPTLNRYSLTTLPIILLFIQSITAPFLLCSILSVLLTYHL-GYLVYLFPLILAMALIL 484

  Fly   346 TLIFFLTRTDTPPIFFRFT------------------------------SGVGFMAAVFLIFCLT 380
            .|..|:|:.:   :..:||                              ..:|.:..:..|..|.
Yeast   485 LLTAFITKVN---LHNKFTLSLDSSNILQEKLQKRKLLERLNTSIQIIFLAIGIINIIIWISLLA 546

  Fly   381 TEVNAMFFTMATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMTATFSAPVFASFVF 445
            ..:..|......||.:|:.....|...|..|..||::|:|:.     |:..|.|.    :...|.
Yeast   547 NSLIEMMEIYQKILGLSKAILGLTIFAWGNSVGDLISNISMC-----RLYKTQTH----YQDRVR 602

  Fly   446 LALPLVVNSFVNAPGNIFPTEGGFGETVCIFLEVGMGFS-MLSVL-------------------- 489
            ||....:.|..:..|.:.....|           |:||| ::|:|                    
Yeast   603 LATKFFMISCASCLGGVMLNSMG-----------GIGFSGLVSMLFIGAFNDNEWWFLRKVKLQE 656

  Fly   490 ------TTNFKLRRACGFL---LVSYYIFFVG 512
                  |.|:|...:|.|:   ::...:||.|
Yeast   657 TSQLDNTLNYKFIVSCVFIILQIILLLLFFGG 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 35/193 (18%)
Na_Ca_ex 365..516 CDD:279963 37/178 (21%)
ECM27NP_012640.4 ECM27 18..>225 CDD:223604 35/193 (18%)
PLN03151 <544..637 CDD:215604 26/112 (23%)
ECM27 <558..721 CDD:223604 33/151 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344060
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4675
OMA 1 1.010 - - QHG57812
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.730

Return to query results.
Submit another query.