DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13223 and Slc24a2

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_006538405.1 Gene:Slc24a2 / 76376 MGIID:1923626 Length:746 Species:Mus musculus


Alignment Length:626 Identity:117/626 - (18%)
Similarity:227/626 - (36%) Gaps:177/626 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VLGMFLITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTA-IASRVQ 112
            |:||    ||:|..:.|....:|.|:|.||.:.|.:::..||.|.:|....:|:.||: |...:.
Mouse   140 VIGM----IYMFIALAIVCDEFFVPSLTVITEKLGISDDVAGATFMAAGGSAPELFTSLIGVFIA 200

  Fly   113 TSKHSFLSCMSQAMFLHIFVAGLVIL--TKPFNMRANTYLRDFGF-----LFLNTVYMDYIHKRP 170
            .|.....:.:..|:|..:||.|:..|  .:..|:......||..|     |.|.|.::|.:    
Mouse   201 HSNVGIGTIVGSAVFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLLMLITFFLDNV---- 261

  Fly   171 KGISW---LAALPSAFIFVGYVVVAIVDQHLLIARIQKMEQRQLNVAEA-LQLEELKPQKEM--- 228
              |.|   |..|.:.|.:|.::...:..:..:...|.:....::.|.|| .:|.|..|..:.   
Mouse   262 --IMWWESLLLLTAYFAYVVFMKFNVQVERWVKQMISRNNVIKVTVPEAQAKLSEFPPASQADGR 324

  Fly   229 ------------------------------------PLKRQ-------------EIDRPSIGHGS 244
                                                |||.:             :.|.|::..||
Mouse   325 TACPTITNDPDCQSLCFEVYPETARHGSCITNVNGEPLKEKTQNSCMEESPTAGDKDGPTLPVGS 389

  Fly   245 RNKRIFRQFWNTVAEFDKDRFHRGTFLVKLYLIVKQPIDMLLRILIPKVDMEAPQYG-WSKLLF- 307
            .:..........||| .|.|..||.....|:..:.:  :.:.:::|..:|..|.:.| :.||.: 
Mouse   390 SSAACSCTSEECVAE-SKPRLQRGGSSASLHNSLMR--NSIFQLMIHTLDPLAEELGSYGKLKYY 451

  Fly   308 ------------------------------------------------NIQVVLVPTYIAYIIVR 324
                                                            :.:|.:.|:..|...|:
Mouse   452 DTMTEEGRFREKASILHKIAKKKCQVDENERQNGAANHVEKIELPNSTSTEVEMTPSSEASEPVQ 516

  Fly   325 GYSIA--------------------------------GLAVYMIALILMIPVATLIFFLTRTDT- 356
            ..:::                                ..|.::|...::.|:     ::|..|. 
Mouse   517 NGNLSHNIEAADAPKATETAEEEDDQPLSLSWPTNTRKQATFLIVFPIVFPL-----WITLPDVR 576

  Fly   357 PPI---FFRFTSGVGFMAAVFLIFCLTTEVNAMFFTMATILQVSQEFSLATAICWALSSNDLVAN 418
            .|.   ||..|    |..::..|...:..:......:...:.:|:|....|.:....|..||:.:
Mouse   577 KPASRKFFPIT----FFGSITWIAVFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITS 637

  Fly   419 LSLAHQGWPRMAMTATFSAPVFASFVFLALPLVVNSFVN--APGNIFPTEGGFGETVCIFLEVGM 481
            :.:|.:|...||::::..:.:|...|.|.||.::.:.::  :|..: .:.|.|...|.:|  :.:
Mouse   638 VIVARKGLGDMAVSSSVGSNIFDITVGLPLPWLLYTIIHRFSPVTV-SSNGLFCAIVLLF--IML 699

  Fly   482 GFSMLSVLTTNFKLRRACGFLLVSYYIFFVGVLILLEKGVI 522
            .|.:||:....:::.:..||::...|..|:.|.:|||..|:
Mouse   700 LFVILSIALCKWRMNKILGFIMFGLYFVFLVVSVLLEDKVL 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 42/155 (27%)
Na_Ca_ex 365..516 CDD:279963 30/152 (20%)
Slc24a2XP_006538405.1 2A1904 <99..746 CDD:273344 117/626 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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