DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13223 and slc24a2

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_017211234.1 Gene:slc24a2 / 751686 ZFINID:ZDB-GENE-060825-277 Length:628 Species:Danio rerio


Alignment Length:532 Identity:107/532 - (20%)
Similarity:206/532 - (38%) Gaps:100/532 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VLGMFLITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTA-IASRVQ 112
            ||.||.: :|:|..:.|....:|.|.|.||.:.|.:::..||.|.:|....:|:.||: |...:.
Zfish   133 VLHMFGM-MYMFIALAIVCDEFFVPALTVITEKLEISDDVAGATFMAAGGSAPELFTSVIGVFIS 196

  Fly   113 TSKHSFLSCMSQAMFLHIFVAGLVIL--TKPFNMRANTYLRDFGFLFLNTV---------YMDYI 166
            .|.....:.:..|:|..:||.|:..|  .:..|:......||..|..:..:         |:.|:
Zfish   197 HSNVGIGTIVGSAVFNILFVIGMCALFSREILNLTWWPLFRDVSFYIIGLIMLIVFFLDNYITYV 261

  Fly   167 HKRPKGISWLAALPSAFIFVGY--VVVAIVDQHLLIARIQKMEQRQLNVAEALQLEELKPQKEMP 229
                :..:.|:...|...|:.:  .|...:...||..::..:|.....|:        .|..|..
Zfish   262 ----ESFALLSCYGSYVTFMKFNSSVETWIKTRLLGNQVDDIEAPPKVVS--------VPDDENK 314

  Fly   230 LKRQEIDRPSIGHGS----------RNKRIFRQFWNTVAEFDKDRFHRGTFLVKLYLIVKQPIDM 284
            |..    :|.:..|.          ||. ||:...:|:....:.:|             |:...:
Zfish   315 LSA----KPRLQRGGSSASLHNTLMRNS-IFQLMIHTLDPLSEGKF-------------KEKASI 361

  Fly   285 LLRILIPKVDMEA--PQYGWSKLLF---------NIQVVLVPTY--------------------- 317
            |.:|...|...||  .:.|..|.:.         |::|.:.|..                     
Zfish   362 LHKIARKKGQDEANGVEDGQRKCMLMDKNLPNSSNVEVEVTPPMNGSAGPEVEVEEEEEDEDQPL 426

  Fly   318 -IAYIIVRGYSIAGLAVYMIALILMIPVATLIFFLTRTDTPPIFFRFTSGVGFMAAVFLIFCLTT 381
             :|:.......:..|.::.|...|.:.:..:....:|...|..|....|.:.|.:  :|:.....
Zfish   427 SLAWPDTIRKQVTYLFIFPIVFPLWLSLPDVRRESSRKFFPVTFLGSISWIAFFS--YLMVWWAH 489

  Fly   382 EVNAMFFTMATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMTATFSAPVFASFVFL 446
            :|       ...:.:::|....|.:....|..||:.::.:|.:|...||::::..:.:|...|.|
Zfish   490 QV-------GETIGITEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITVGL 547

  Fly   447 ALPLVVNSFVNAPGNIFPTEGG-FGETVCIFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYIFF 510
            ..|.::.|.:|...::..:..| |...|.:||.  :.|.::|:....:|:.:..|||:...|..|
Zfish   548 PFPWLLFSMLNDFSSVAVSSNGLFCAIVLLFLM--LLFVIISIAVCKWKMSKMLGFLMFLLYFVF 610

  Fly   511 VGVLILLEKGVI 522
            :.|.::||..:|
Zfish   611 LVVSVMLEDKII 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 38/158 (24%)
Na_Ca_ex 365..516 CDD:279963 33/151 (22%)
slc24a2XP_017211234.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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