DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13223 and slc24a5

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001025451.1 Gene:slc24a5 / 570312 ZFINID:ZDB-GENE-031210-1 Length:513 Species:Danio rerio


Alignment Length:532 Identity:110/532 - (20%)
Similarity:176/532 - (33%) Gaps:167/532 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VLGMFLITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTAI------ 107
            :|..|:|..|:...:.|....||.|:|.||::.|.:::..||.|.:|..:.:|:..||.      
Zfish    81 ILIYFMIIFYMLLSVSIVCDEYFLPSLEVISERLGLSQDVAGATFMAAGSSAPELVTAFLGVFVT 145

  Fly   108 -----ASRVQTSKHSFLSCMSQAMFLHIFVAGLVILTKPFNMRANTYLRD-----------FGFL 156
                 .|.:..|....|.|:..|..|.....|.:.....|        ||           ...:
Zfish   146 KGDIGVSTIMGSAVYNLLCICAACGLLSSAVGRLSCWPLF--------RDCVAYAISVAAVIAII 202

  Fly   157 FLNTVYMDYIHKRPKGISWLAALPSAFIFVGYVVVAIVDQHLLIARIQKMEQRQLNVAEALQLEE 221
            ..|.||            |........::..||.|...|                     |::.|
Zfish   203 SDNRVY------------WYDGACLLLVYGVYVAVLCFD---------------------LRISE 234

  Fly   222 LKPQKEMP----LKRQEID----RPSIGHGSRNK-RIFRQFWNTVAEFDKDRFHRGTFLVKLYL- 276
            ...|:..|    ||.::.|    :|.:|....:. |:.|:..|....|..|   .|...:.|.| 
Zfish   235 YVMQRFSPCCWCLKPRDRDSGEQQPLVGWSDDSSLRVQRRSRNDSGIFQDD---SGYSHLSLSLH 296

  Fly   277 -----------IVKQPIDMLLRILIPKVDMEAPQYGWSKLLFNIQVVLVPTYIAYIIVRGYSIAG 330
                       :...|...|.|||            |                            
Zfish   297 GLNEISDEHKSVFSMPDHDLKRIL------------W---------------------------- 321

  Fly   331 LAVYMIALILMIPVATLIFFLTRTDTPPI---FFRFT---SGVGFMAAVFLIFCLTTEVNAMFFT 389
                    :|.:||:||:|........|.   |:..|   |.|...|..:::..:.|.|......
Zfish   322 --------VLSLPVSTLLFVSVPDCRRPFWKNFYMLTFLMSAVWISAFTYVLVWMVTIVGETLGI 378

  Fly   390 MATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMTATFSAPVFASFVFLALPLVVNS 454
            ..|::.:       |.:....|..|.||::.:|.:|...|||:....:.|| ..:.|.||..:.:
Zfish   379 PDTVMGM-------TLLAAGTSIPDTVASVMVAREGKSDMAMSNIVGSNVF-DMLCLGLPWFIQT 435

  Fly   455 F---------VNAPGNIFPTEGGFGETVCIFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYIFF 510
            .         ||:.|.:|.:        |..| :.:.|..|:|....:||....|.:.::.||.|
Zfish   436 VFVDVGSPVEVNSSGLVFMS--------CTLL-LSIIFLFLAVHINGWKLNWKLGLVCLACYILF 491

  Fly   511 VGVLILLEKGVI 522
            ..:.||.|.|:|
Zfish   492 ATLSILYELGII 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 36/166 (22%)
Na_Ca_ex 365..516 CDD:279963 36/159 (23%)
slc24a5NP_001025451.1 ECM27 81..497 CDD:223604 105/524 (20%)
Na_Ca_ex 84..228 CDD:279963 35/163 (21%)
Na_Ca_ex 346..497 CDD:279963 38/167 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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