DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13223 and slc24a1

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_009291877.2 Gene:slc24a1 / 558299 ZFINID:ZDB-GENE-060503-191 Length:741 Species:Danio rerio


Alignment Length:607 Identity:113/607 - (18%)
Similarity:215/607 - (35%) Gaps:171/607 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 WSVLGMFLITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTA-IASR 110
            |..|.:|.: :|:|..:.|....:|.|||.||.|.|.:::..||.|.:|....:|:.||: |...
Zfish   169 WVSLHIFGM-VYMFVSLAIVCDEFFVPTLGVITDKLAISDDVAGATFMAAGGSAPELFTSLIGVF 232

  Fly   111 VQTSKHSFLSCMSQAMFLHIFVAGLVILTKPFNMRANTY--LRDFGFLFLNTVYMDYIHKRPKGI 173
            :..|.....:.:..|:|..:||.|:..|.....:....:  .||..|..|:.: |..|......|
Zfish   233 ISHSNVGIGTIVGSAVFNILFVIGMCALFSREMLHLTWWPLFRDVSFYILDLI-MLIIFFLDNTI 296

  Fly   174 SWLAALPSAFIFVGYVV-VAIVDQHLLIARIQKME-QRQLNVAEALQLEELKPQKEMPLKRQEID 236
            .|   ..|..:..||.: |..:..::.:.|..|.: .:..::.:.:.:||  |:|:.....:| :
Zfish   297 MW---WESMMLVGGYALYVTFMKFNVQLERAFKSQLSKHKSIVKVIAVEE--PEKDNGTSGEE-N 355

  Fly   237 RP----------------------SIGHGSRNKRIFRQFWNTV------AEFDKDRFHRGTFLVK 273
            ||                      |:.:.:....||:...:|:      :.|:.|...|.:...|
Zfish   356 RPPEPEDKNRLKLKPTLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGEESVFNGDAKARSSLECK 420

  Fly   274 LYLIVKQPIDMLLRILIPKVD-----------------------------------MEAPQYGWS 303
            :..  |....:|..:...||:                                   .||.:.|  
Zfish   421 VKF--KDKAQILNDMARGKVENKKKEKSGEGDDQSEQTKDSKDAPPGAKDEDTNQKSEAQKDG-- 481

  Fly   304 KLLFNIQVVLVPTYIAYIIVRGYS----------------------------------------I 328
                            .|...|.|                                        .
Zfish   482 ----------------DIAAGGGSENPGGSDNSGDDDEDDSDEESDDDDDDDDDDDDDDDENEDE 530

  Fly   329 AG-----------------LAVYMIALILMIPVATLIFFLT----RTDTPPIFFRFTSGVGFMAA 372
            ||                 .|.|:..|.::.|:     :||    |......||..|    |:.:
Zfish   531 AGEDGDEPLSLEWPDTRRKQATYLFLLPIVFPL-----WLTVPDVRNPASKKFFVIT----FLGS 586

  Fly   373 VFLIFCLTTEVNAMFFTMATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMTATFSA 437
            :..|...:..:......:...:.:|:|....|.:....|..||:.::.:|.:|...||::::..:
Zfish   587 IVWIAIFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGS 651

  Fly   438 PVFASFVFLALPLVVNSFVN--APGNIFPTEGGFGETVCIFLEVGMGFSMLSVLTTNFKLRRACG 500
            .:|...:.|.:|.::.||.:  ||..: .:.|.|...|.:||.  :.|.::|:....:::.:..|
Zfish   652 NIFDITMGLPVPWLMFSFFHSFAPVPV-SSNGLFCAIVLLFLM--LLFVIISIAACKWRMNKVLG 713

  Fly   501 FLLVSYYIFFVGVLILLEKGVI 522
            |.:...|..|:.:.::||..:|
Zfish   714 FTMFILYFVFLVLSVMLEDRII 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 41/150 (27%)
Na_Ca_ex 365..516 CDD:279963 30/152 (20%)
slc24a1XP_009291877.2 Na_Ca_ex <112..741 CDD:332332 113/607 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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