DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13223 and slc24a4a

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_005158898.1 Gene:slc24a4a / 550467 ZFINID:ZDB-GENE-050417-291 Length:621 Species:Danio rerio


Alignment Length:552 Identity:108/552 - (19%)
Similarity:205/552 - (37%) Gaps:124/552 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 NSFNSFWSVLGMFLITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFT 105
            |...|..:||......:|:|..:.|...:||..:|..|.:.|.::|..||.|.:|..:.:|:.|.
Zfish   109 NQQRSQGAVLLHIFAALYMFLALAIVCDDYFVTSLEKICEKLHLSEDVAGATFMAAGSSAPELFA 173

  Fly   106 AIASRVQTSKHSFL---SCMSQAMF--------LHIFVAGLVILTKPFNMRANTYLRDFGFLFLN 159
            :|.....|  |..:   :.:..|:|        ..||...:|.|||....|.::|........:.
Zfish   174 SIIGVFIT--HGDVGVGTIVGSAVFNILCIIGVCGIFAGQVVFLTKYAVFRDSSYYIISVIALIV 236

  Fly   160 TVYMDYIHKRPKGISWLAALPSAFIFVGYVVVAIVD---QHLLIARIQKMEQRQLNVAEALQLEE 221
            .:|.|       .|.|..:|....:::||::|...:   |:|...:    |.:::....|:. .|
Zfish   237 FIYDD-------EILWWESLVLIVMYLGYIIVMKFNTSLQNLFNGK----EDKRVTNGNAVS-SE 289

  Fly   222 LKPQKEMPLKRQEIDRPSIGHGSRNKRIFRQFWN-----TVAEFDKDRFH-RGTFLVKLYLIVKQ 280
            ::|..:                     .|.|||:     .:|....::.: ||:.::...::...
Zfish   290 MEPGND---------------------CFEQFWDDPSWPLLAPVKPNKIYTRGSVVMVDEMMNSS 333

  Fly   281 P-----IDMLLRILI-----PKVDMEAPQYGWSKLLFN-----------IQVVLVPTYIAYIIVR 324
            |     .:..||::|     ||..:...    |:|:.|           :..|||....|..:..
Zfish   334 PPHYRFPEAGLRVMITNHFGPKTRLRMA----SRLIINEQQRLVKSANGVDSVLVSDQKADTMEN 394

  Fly   325 G-----------------YSIAGLAVYMIALILMIPVATLIFFLTRTDTPPIFFRFTSGVGFMAA 372
            |                 :.:...|:..:...:..|::.|::|     |.|...:......||.:
Zfish   395 GNVAEDKLSEEQENEISPFRLPEGAMDTVKFFISWPISLLLYF-----TIPNCAKKRWECCFMLS 454

  Fly   373 VFLIFCLTTEVNAMFFTMATI----LQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMTA 433
            .||........:.:...|.||    |.:.......|.:....|..|.:|:|.:|.||...||::.
Zfish   455 FFLSTVWIAAFSYILVWMVTIVGYTLGIPDVIMGITFLAAGTSVPDCIASLIVARQGLGDMAVSN 519

  Fly   434 TFSAPVFASFVFLALPLVVNSF---------VNAPGNIFPTEGGFGETVCIFLEVGMGFSMLSVL 489
            |..:.||...|.|.:|..:.:.         :|:.|.::..         :.|...:..::|.:.
Zfish   520 TIGSNVFDILVGLGVPWGIQTMAVNYGSVVKINSRGLVYSV---------VLLLGSVALTVLGIH 575

  Fly   490 TTNFKLRRACGFLLVSYYIFFVGVLILLEKGV 521
            ...::|....|..::..|..|:...|::|..|
Zfish   576 VNRWRLDLRLGIYVLVLYAIFLTFSIMIEYNV 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 39/159 (25%)
Na_Ca_ex 365..516 CDD:279963 32/163 (20%)
slc24a4aXP_005158898.1 TIGR00367 119..596 CDD:273039 100/529 (19%)
Na_Ca_ex 120..262 CDD:279963 35/150 (23%)
Na_Ca_ex 451..602 CDD:279963 32/159 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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