DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13223 and CG1090

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001262252.1 Gene:CG1090 / 40551 FlyBaseID:FBgn0037238 Length:633 Species:Drosophila melanogaster


Alignment Length:581 Identity:113/581 - (19%)
Similarity:196/581 - (33%) Gaps:192/581 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTAIASRVQTSKHSF 118
            |:.::.|:.:.|....||..:|..:.:.|:::...||.|.:|..:.:|:..|.:...........
  Fly   119 LVAVFTFFGLAIVCDEYFVASLDRLCEELKLSPDVAGATFMAAGSSAPELATVVIGVFFAKDDIG 183

  Fly   119 LS-CMSQAMFLHIFVAGLVILTKPFNMRANTY--LRDFGF------LFLNTVYMDYIHKRPKGIS 174
            :| .:..|:|..:||..:..|......:.|.:  :||..|      :.|..::.|.       ||
  Fly   184 ISGVIGSAVFNIMFVISVCALCSGTVCQLNWWPLVRDCFFYCVSILVMLIIIFNDV-------IS 241

  Fly   175 WLAALPSAFIFVGYVVVAIVDQHL--------LIARI-QKMEQRQL----NVAEALQLEE----- 221
            ...::.....:|||.|....:..|        |..:: .|.||..|    ||.|....:|     
  Fly   242 CFESVVMLLCYVGYCVALHFNTELERWALGLNLPFKLPSKEEQSALVTYKNVPEGSYTQESVGQT 306

  Fly   222 -------------LKPQKEM-----------------------PLKR-QEIDRPSIGHGSRNKRI 249
                         .|||.:.                       |:.. ..:|...:||..:....
  Fly   307 QGQKATDDSETRSAKPQSDYQDYSDPNPTWDPNAAWGDESQPNPVANPPPVDDWGMGHSGQENMG 371

  Fly   250 FR---------------------QFWNTVA----------EFDKDRFHRG-----------TFLV 272
            :.                     |..:|.|          ..||.|..|.           ..||
  Fly   372 YHADQPESVVTGDGPPAAVKSGGQVVSTQATSAGGNDYYKSTDKQREPRRDPLLRPMEGGLPALV 436

  Fly   273 KLYLIVKQPIDMLLRILIPKVDMEAPQY-GWSKLLFNIQVVLVPTYIAYIIVRGYSIAGLAVYMI 336
            ..|::  .||..|.:..:|  |....|| .|....|.:.:|.:..|..::           |:||
  Fly   437 SWYVV--YPIHFLCKKTMP--DCRQEQYRNWYPFTFLMSMVWISFYSYFM-----------VWMI 486

  Fly   337 ALI---LMIPVATLIFFLTRTDTPPIFFRFTSGVGFMAAVFLIFCLTTEVNAMFFTMATILQVSQ 398
            .:|   |.||           ||       ..|:.|:||                          
  Fly   487 TVIGSTLAIP-----------DT-------VMGLTFVAA-------------------------- 507

  Fly   399 EFSLATAICWALSSNDLVANLSLAHQGWPRMAMTATFSAPVFASFVFLALPLVVNSFVNAPG--- 460
                      .:|..|.::::::..:|:..||::....:.||...|.|.||..:.:.:..||   
  Fly   508 ----------GVSVPDALSSIAVIKEGFGDMAVSNAIGSNVFDILVCLGLPWFIQTAIIKPGSHV 562

  Fly   461 NIFPTEGGFGETVCIFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYIFFVGVLILLEKGV 521
            |:. ::|....|:.:|..|  .|.:||.....:||.:..|.:|:.:|:||:.:..|.|..|
  Fly   563 NVI-SKGLAYSTLSLFSTV--VFLILSTHLNGWKLDKRLGIILMVWYLFFITLASLYELNV 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 31/148 (21%)
Na_Ca_ex 365..516 CDD:279963 32/153 (21%)
CG1090NP_001262252.1 TIGR00367 116..609 CDD:273039 108/568 (19%)
Na_Ca_ex 117..257 CDD:279963 30/144 (21%)
Na_Ca_ex 463..615 CDD:279963 45/219 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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