DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13223 and ncx-5

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_505690.2 Gene:ncx-5 / 191715 WormBaseID:WBGene00003570 Length:656 Species:Caenorhabditis elegans


Alignment Length:618 Identity:122/618 - (19%)
Similarity:217/618 - (35%) Gaps:228/618 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTAIASRVQTSKHSFL 119
            :.||:|..:.:....:|.|:|.||.::|.:::..||.|.:|....:|:|||::            
 Worm   105 LLIYMFVALAVVCDEFFVPSLSVITEVLAISDDVAGATFMAAGGSAPEFFTSL------------ 157

  Fly   120 SCMSQAMFLHIFVA------GLVILTKPFNM-----------RANTYL------RDFGF----LF 157
                    ..:|||      |.::.:..||:           |...:|      ||..|    ||
 Worm   158 --------FGVFVAQDNVGVGTIVGSATFNILCVLAFCTLFSRQVLHLTWWPLFRDMSFYTLSLF 214

  Fly   158 LNTVYM-DYIHKRPKGISWLAALPSAFIFVGYVVVAIVDQHLLIARIQKMEQ---RQLNVAEALQ 218
            |..::. |.:      |.|..||....:::.|......:..|.:    |.:|   |::.:...:.
 Worm   215 LLLIFFGDEV------IEWQEALVMFSMYIAYGFFMKFNGFLEL----KTKQFLFRKVGIGSEIA 269

  Fly   219 LEEL------------------KPQKEMPLKR--QEIDRPSIGH-----------------GSRN 246
            .|.:                  .|::..|:..  ||: |.||..                 ..|:
 Worm   270 PETIVDAAAGCTPRSPHSLGAQGPRRSFPMIHGGQEV-RKSIAQLVIGDEDDTSSSSSSSSSERS 333

  Fly   247 KRI---------FRQFWNTV---------AEFD-----------------------------KDR 264
            .:|         .||...|:         |:|:                             :..
 Worm   334 NKIKPVSNGVPEIRQNGRTIMVKPANDPDAKFNNQNSIKTVITPIDFGDDHTIVINNNNNGKRKN 398

  Fly   265 FHRGTFLVKLYLIVKQPIDMLLRIL------IPKV----------------DMEAPQYGWSKLLF 307
            .:.||:|..:..|  .|.:..|.:.      :|.:                |:..|:....||::
 Worm   399 GNNGTYLTPVEAI--NPSNGHLELAQTNGNPVPPIALDNLSIASSTAEKPLDLSWPEANHKKLIY 461

  Fly   308 NIQVVLVP-TY-IAYII--VRGYSIAG-LAVYMIALILMIPVATLIFFLTRTDTPPIFFRFTSGV 367
               :.|.| |: :||.:  ||..|:.. .|:..|..||.|...:.:.         :::..|.|.
 Worm   462 ---LFLAPITFPLAYTLPDVRKPSLRKFFAITFIGAILWIAAYSYLM---------VWWANTIGE 514

  Fly   368 GFMAAVFLIFCLTTEVNAMFFTMATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMT 432
                    .|.:.||:..:                 |.:....|..||:.::.:|.:|...||::
 Worm   515 --------TFGIPTEIMGL-----------------TILAAGTSIPDLITSVIVARKGLGDMAVS 554

  Fly   433 ATFSAPVFASFVFLALP----LVVNSFVNAP-GNIFPTEGGFGETVCIFLEVGMGFSMLSVLTT- 491
            ::..:.:|...|.|.:|    ..:..|.:.| .||..|..|.   ||   .:|:.|:||.||.| 
 Worm   555 SSIGSNLFDVCVGLPIPWLIHFAIGVFKSEPTQNISVTSNGL---VC---SLGLLFAMLIVLLTC 613

  Fly   492 ----NFKLRRACGFLLVSYYIFFVGVLILLEKG 520
                .:|:.:..|.|::..|..|..:.||||.|
 Worm   614 VAISRWKMDKFFGLLMIFSYCGFCMLCILLETG 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 37/166 (22%)
Na_Ca_ex 365..516 CDD:279963 36/160 (23%)
ncx-5NP_505690.2 Na_Ca_ex 102..244 CDD:279963 37/164 (23%)
Na_Ca_ex 486..642 CDD:279963 42/195 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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