DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13223 and ncx-10

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001256094.1 Gene:ncx-10 / 190821 WormBaseID:WBGene00003575 Length:668 Species:Caenorhabditis elegans


Alignment Length:612 Identity:120/612 - (19%)
Similarity:244/612 - (39%) Gaps:123/612 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CKFVQTTPDCLINMNLFNYLGW-HYCKVDVRNSFNSFWSVLGMFLITIYVFWMMQITIKNYFCPT 74
            |.:::...|....   ..||.| .|.|.:...|......::.:..: :::|.:|.:...::|.|:
 Worm    69 CAYIKCNKDACEG---GGYLQWSEYIKCEHSRSIRIILIIISIIYL-LFLFVVMTVVADDFFSPS 129

  Fly    75 LMVIADLLRMNESTAGVTVLAIANGSPDFFTAIASRVQTSKH----SFLSCMSQAMFLHIFVAGL 135
            :..|...|:::||.||||.||..||:||.|.:|||.:.|.|.    :....:...:|:...|...
 Worm   130 IAGIVRHLKISESIAGVTFLAFGNGAPDVFGSIASVITTPKPKADLAIGDIIGGGIFVTTVVLSA 194

  Fly   136 VILTKPFNMRANTYLRDFGF-----LFLNTVYMDYIHKRPKGISWLAALPSAF--IFVGYVVVAI 193
            :||||.|.:.....:||..|     :||...::.:.|..    .|   :|..|  ::..|||..|
 Worm   195 IILTKSFRIAILATIRDIVFFIIADIFLAIWFLTFNHVE----IW---MPLTFLGLYAAYVVSVI 252

  Fly   194 V----DQHLLIARIQKMEQRQ-------------------LNVAEAL-------------QLEEL 222
            :    .:....||.:|:|..:                   ::.|..:             .::..
 Worm   253 LMRLNSKRRKRARHEKIENARKESAMNHHTHKISTFIGFFMDYAHVINFFANNKISSMTNNVKNF 317

  Fly   223 KPQKEMPLKRQEIDRPSIGHGSR------NKRIFRQF--------------------WNTVAEF- 260
            ...||..|:...:|..|...|..      ::.:::.:                    |..|.:. 
 Worm   318 LDGKEDSLEDGLVDETSDDEGVEAEFHYAHRHVYKSYDEASLAFTDVEEIQPKTWKSWEWVRDVR 382

  Fly   261 -------DKDRFHRGTFLVKLYLIVKQPIDMLLRILIPKVDMEAPQYGWSKLLF------NIQVV 312
                   ..|.|:...:..:...:|.......|::.||..:|.     |||.:.      :||:.
 Worm   383 NHLRPWPGNDEFYEMNYFSRFITVVAVIPTFFLKLTIPSNEMP-----WSKPILIIHCFCSIQLA 442

  Fly   313 LVPTYIAYIIVRGYSIAGLAVYMIALILMIPVATLIFFLTRTDTPPIFFR-FTSGVGFMAAVFLI 376
            |   :...|..:........:::..|::.|.::.|....|..|....::| ..|.:||:.::..|
 Worm   443 L---FAVQISAKSPFHGSPGLWLYGLLISIILSLLALRFTPLDREQKYYREVYSYLGFLMSIAWI 504

  Fly   377 FCLTTEVNAMFFTMATILQVSQEFSLATAICWALSSNDLVANLSLAHQGWPRMAMTATFSAPVFA 441
            :.:::|:..:...:.....||||....|.:.|:....|:|:::::..||:|:|||.|....|:|:
 Worm   505 YTISSEIINVITMIGVATGVSQEILGLTIMAWSNCIGDIVSDVAVVKQGFPKMAMAAAIGGPLFS 569

  Fly   442 SFVFLALPLVVNSFVN-------APGNIFPTEGGFGETV--------CIFLEVGMGFSMLSVLTT 491
            ........:.:.::::       .|..|...:|...:.:        .:||.:.:..|::::...
 Worm   570 KLYSRPCQIKITTYISDLLIGFGLPFTIACLQGKQIDLIITPVYRLLMLFLAISLFTSLIAIFVQ 634

  Fly   492 NFKLRRACGFLLVSYYIFFVGVLILLE 518
            .||:|......|::.::.|:..::|.|
 Worm   635 RFKVRWPHAVALLTVFVAFLIFVLLSE 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 43/159 (27%)
Na_Ca_ex 365..516 CDD:279963 33/165 (20%)
ncx-10NP_001256094.1 PLN03151 35..571 CDD:215604 107/520 (21%)
Na_Ca_ex 113..253 CDD:279963 43/146 (29%)
Na_Ca_ex 492..659 CDD:279963 33/166 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4675
OMA 1 1.010 - - QHG57812
OrthoDB 1 1.010 - - D257493at33208
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 1 1.000 - - mtm4752
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.880

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