DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13223 and ncx-6

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_499146.2 Gene:ncx-6 / 182354 WormBaseID:WBGene00003571 Length:590 Species:Caenorhabditis elegans


Alignment Length:570 Identity:137/570 - (24%)
Similarity:250/570 - (43%) Gaps:106/570 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SQKCKFVQTTPDCLINMNLFNYLGW-HYCKVDVRNSFNSFWSVLGMFLITIYVFWMMQITIKNYF 71
            :|.|::|:...|   |.....|:.| .|.:.....:......:.|:..:.: :|.|:.....::|
 Worm    62 TQVCEYVKCNDD---NCEGGGYVLWTRYVECASSPAVRIILIITGVIYMLV-LFIMVSSAADDFF 122

  Fly    72 CPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTAIASRVQ--TSKHSFL--SCMSQAMFLHIFV 132
            .|::..|...||::||.||||.:|..||:||.|.||||.:.  |.|....  ......:|:...|
 Worm   123 SPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGAIASVLSSPTPKADLALGELFGAGLFVTTMV 187

  Fly   133 AGLVILTKPFNMRANTYLRD-------FGFLFLNTVYMDYIHKRPKGISWLAALPSAF--IFVGY 188
            ..:.|.|:||.....:.:||       ..||....||.|::.      .|   :|..|  :::.|
 Worm   188 LAVTIFTRPFKAEVFSSIRDIAFYLVALAFLAFCFVYYDHVE------IW---MPITFLGVYLIY 243

  Fly   189 VVVAIVDQHLLIARIQKMEQR--QLNVAEALQLEE------------------LKPQKEM----P 229
            |...|:.| :|..|.:|.|::  ::...:...||:                  :|.:.|:    |
 Worm   244 VCTVILSQ-ILHNRHKKDEEKVDEVKTVDTDSLEDDDDIYVSHGHHVLHAHEVMKMEAEIEAVEP 307

  Fly   230 LKRQEIDRPSIGHGSRNKRIFRQF------WNTVAEFDKDRFHRGTFLVKLYLIVKQPIDMLLRI 288
            ||....           :.:...|      |.::.|:|:....:     |:..::....:.|.::
 Worm   308 LKTWSF-----------RGVVHDFKEHLKPWPSMDEWDEMNIFQ-----KVIAVLNTIPNFLFKL 356

  Fly   289 LIPKVDMEAPQYGWSKLLFNIQVVLVPTYIAYIIVRGYSIA------GLAVYMIALILMIPVATL 347
            .||  ..|.|   |||.:..:|.::.|.::.:.| :..||:      ||.:|.:.|.::: .|.:
 Worm   357 TIP--HSEQP---WSKPITLLQCLICPVFLLFCI-QVCSISPFPNSPGLWMYGLILSVLL-TAAV 414

  Fly   348 IFFLTRTDTPPIFFRFTSGVGFMAAVFLIFCLTTEVNAMFFTMATILQVSQEFSLATAICWALSS 412
            :||......||.:....|..||:.::..|:.:::||..:...:..:.:||.|....|.:.|:.|.
 Worm   415 LFFTELHKEPPFYKSLISYAGFLMSIAWIYLISSEVVNVVTMLGVVSRVSHEVLGLTILAWSNSI 479

  Fly   413 NDLVANLSLAHQGWPRMAMTATFSAPVFASFVFLALPLV--------VNSFVNAPGNIFPTEGGF 469
            .||:|::|:|.||:|||||.|.....:|...:...||..        ::..:|      ||.   
 Worm   480 GDLIADVSVAKQGYPRMAMAAAIGGQLFNLLIGFGLPFTIAKIQGKSISMIIN------PTY--- 535

  Fly   470 GETVCIFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYI-FFVGVLILLE 518
             ..:.:||.:.:.|:::::....:.|||...:.||..|| |||.:.:.|:
 Worm   536 -RLLMLFLAISLIFTLIAMFAQKYFLRRIHSYSLVFIYISFFVFIGLSLD 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 44/161 (27%)
Na_Ca_ex 365..516 CDD:279963 44/159 (28%)
ncx-6NP_499146.2 Na_Ca_ex 105..249 CDD:279963 43/153 (28%)
Na_Ca_ex 431..579 CDD:279963 44/157 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165714
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4675
OMA 1 1.010 - - QHG57812
OrthoDB 1 1.010 - - D257493at33208
OrthoFinder 1 1.000 - - FOG0000933
OrthoInspector 1 1.000 - - mtm4752
orthoMCL 1 0.900 - - OOG6_101277
Panther 1 1.100 - - O PTHR12266
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.700

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