DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13223 and slc24a4b

DIOPT Version :10

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_002665845.2 Gene:slc24a4b / 100334346 ZFINID:ZDB-GENE-081031-75 Length:636 Species:Danio rerio


Alignment Length:567 Identity:107/567 - (18%)
Similarity:192/567 - (33%) Gaps:187/567 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SVLGMFLITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTAIASRVQ 112
            :||...:..:|:|..:.|...:||..:|..|.:.|.::|..||.|.:|..:.:|:.|.::.....
Zfish   152 AVLLHIIAALYMFLALAIVCDDYFVTSLEKICEKLNLSEDVAGATFMAAGSSAPELFASVIGVFI 216

  Fly   113 TSKHSFL---SCMSQAMF--------LHIFVAGLVILTKPFNMRANTYLRDFGFLFLNTVYMDYI 166
            |  |..:   :.:..|:|        ..||...:|:||      .....||..|..|:.|.: .:
Zfish   217 T--HGDVGVGTIVGSAVFNILCIIGVCGIFAGQVVLLT------WWAVFRDSFFYILSVVAL-IV 272

  Fly   167 HKRPKGISWLAALPSAFIFVGYVVVAIVDQHLLIARIQKMEQRQ-------LNVAEALQLEELK- 223
            ....:.|.|..:|....::..|:::...:     :|:||...|:       .|.|...:||::| 
Zfish   273 FIYDEKIVWWESLVLVVMYACYILIMKFN-----SRLQKFFTRKGNKNVANGNAAAGSELEDVKT 332

  Fly   224 --------------------PQKEMP--------------------------LKRQEI------- 235
                                |....|                          .:||.:       
Zfish   333 SKIYSRGSVVMVDEIINASPPNYRFPEAGLRVMVTNHFGPKTRLRMASRLIITERQRLVQSANGV 397

  Fly   236 ------DRPSIGHGSRNKRIFRQFWNTVAEFDKDRFHRGTFLV-----------KLYLIVKQPID 283
                  .:|.|.:|:            |.| ||....:.:.|.           :...::..|:.
Zfish   398 ETAVVDGKPDIENGN------------VPE-DKSTEEKESELTTPFRLPDGCMNRTKWLISWPLL 449

  Fly   284 MLLRILIPKVDMEAPQYGWSKLLFNIQVVLVPTYIAYIIVRGYSIAGLAVYMIALI---LMIPVA 345
            ::|...||    ...:..|.| .|.:..:|...:||   |..|    ..|:|:.:|   |.||..
Zfish   450 LILFFTIP----NCAKSRWEK-YFMLSFILSTVWIA---VFSY----FMVWMVTIIGYTLGIPDV 502

  Fly   346 TLIFFLTRTDTPPIFFRFTSGVGFMAAVFLIFCLTTEVNAMFFTMATILQVSQEFSLATAICWAL 410
            .:                  |:.|:||                                    ..
Zfish   503 IM------------------GITFLAA------------------------------------GT 513

  Fly   411 SSNDLVANLSLAHQGWPRMAMTATFSAPVFASFVFLALPLVVNSF-VNAPGNIFPTEGGFGETVC 474
            |..|.:|:|.:|.||...||::.|..:.||...|.|.:|..:.:. ||....:.....|...:|.
Zfish   514 SVPDCIASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWALQTMAVNYGSVVMINSRGLLYSVV 578

  Fly   475 IFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYIFFVGVLILLEKGV 521
            :.|. .:..::|.:...::||....|..::..|..|:...|::|..|
Zfish   579 LLLG-SVALTILGIHLNHWKLDFKLGVYVLLLYAVFLCFSIMIEYNV 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 PLN03151 10..522 CDD:215604 107/567 (19%)
slc24a4bXP_002665845.2 2A1904 <112..621 CDD:273344 105/562 (19%)

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