DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13223 and slc24a4b

DIOPT Version :9

Sequence 1:NP_610656.1 Gene:CG13223 / 36190 FlyBaseID:FBgn0033599 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_002665845.2 Gene:slc24a4b / 100334346 ZFINID:ZDB-GENE-081031-75 Length:636 Species:Danio rerio


Alignment Length:567 Identity:107/567 - (18%)
Similarity:192/567 - (33%) Gaps:187/567 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SVLGMFLITIYVFWMMQITIKNYFCPTLMVIADLLRMNESTAGVTVLAIANGSPDFFTAIASRVQ 112
            :||...:..:|:|..:.|...:||..:|..|.:.|.::|..||.|.:|..:.:|:.|.::.....
Zfish   152 AVLLHIIAALYMFLALAIVCDDYFVTSLEKICEKLNLSEDVAGATFMAAGSSAPELFASVIGVFI 216

  Fly   113 TSKHSFL---SCMSQAMF--------LHIFVAGLVILTKPFNMRANTYLRDFGFLFLNTVYMDYI 166
            |  |..:   :.:..|:|        ..||...:|:||      .....||..|..|:.|.: .:
Zfish   217 T--HGDVGVGTIVGSAVFNILCIIGVCGIFAGQVVLLT------WWAVFRDSFFYILSVVAL-IV 272

  Fly   167 HKRPKGISWLAALPSAFIFVGYVVVAIVDQHLLIARIQKMEQRQ-------LNVAEALQLEELK- 223
            ....:.|.|..:|....::..|:::...:     :|:||...|:       .|.|...:||::| 
Zfish   273 FIYDEKIVWWESLVLVVMYACYILIMKFN-----SRLQKFFTRKGNKNVANGNAAAGSELEDVKT 332

  Fly   224 --------------------PQKEMP--------------------------LKRQEI------- 235
                                |....|                          .:||.:       
Zfish   333 SKIYSRGSVVMVDEIINASPPNYRFPEAGLRVMVTNHFGPKTRLRMASRLIITERQRLVQSANGV 397

  Fly   236 ------DRPSIGHGSRNKRIFRQFWNTVAEFDKDRFHRGTFLV-----------KLYLIVKQPID 283
                  .:|.|.:|:            |.| ||....:.:.|.           :...::..|:.
Zfish   398 ETAVVDGKPDIENGN------------VPE-DKSTEEKESELTTPFRLPDGCMNRTKWLISWPLL 449

  Fly   284 MLLRILIPKVDMEAPQYGWSKLLFNIQVVLVPTYIAYIIVRGYSIAGLAVYMIALI---LMIPVA 345
            ::|...||    ...:..|.| .|.:..:|...:||   |..|    ..|:|:.:|   |.||..
Zfish   450 LILFFTIP----NCAKSRWEK-YFMLSFILSTVWIA---VFSY----FMVWMVTIIGYTLGIPDV 502

  Fly   346 TLIFFLTRTDTPPIFFRFTSGVGFMAAVFLIFCLTTEVNAMFFTMATILQVSQEFSLATAICWAL 410
            .:                  |:.|:||                                    ..
Zfish   503 IM------------------GITFLAA------------------------------------GT 513

  Fly   411 SSNDLVANLSLAHQGWPRMAMTATFSAPVFASFVFLALPLVVNSF-VNAPGNIFPTEGGFGETVC 474
            |..|.:|:|.:|.||...||::.|..:.||...|.|.:|..:.:. ||....:.....|...:|.
Zfish   514 SVPDCIASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWALQTMAVNYGSVVMINSRGLLYSVV 578

  Fly   475 IFLEVGMGFSMLSVLTTNFKLRRACGFLLVSYYIFFVGVLILLEKGV 521
            :.|. .:..::|.:...::||....|..::..|..|:...|::|..|
Zfish   579 LLLG-SVALTILGIHLNHWKLDFKLGVYVLLLYAVFLCFSIMIEYNV 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13223NP_610656.1 Na_Ca_ex 45..194 CDD:279963 35/156 (22%)
Na_Ca_ex 365..516 CDD:279963 30/151 (20%)
slc24a4bXP_002665845.2 TIGR00367 155..581 CDD:273039 95/518 (18%)
Na_Ca_ex 156..298 CDD:279963 33/150 (22%)
Na_Ca_ex 467..619 CDD:279963 42/213 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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