DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr47Ea and Lcp1

DIOPT Version :9

Sequence 1:NP_610654.1 Gene:Cpr47Ea / 36188 FlyBaseID:FBgn0033597 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:118 Identity:39/118 - (33%)
Similarity:58/118 - (49%) Gaps:11/118 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VLALCCLSFIQAQPQRGLPPPRGNSFDANAVILKQNFDLNPDGSYQYNYETSNGIRADEAGYLKN 76
            |:....|....|.|.  :|...|.|.|.:|.:|.|:.|:..|| :..:..|||||....:|....
  Fly     5 VMICAVLGLAVANPP--VPHSLGRSEDVHADVLSQSDDVRADG-FDSSLHTSNGIEQAASGDAHG 66

  Fly    77 PGSQIEAQVMQGSYSYTGPDGVVYTITYIADENGYRAEGAHIPTPPPVRAAAA 129
            .        :.|::.:..|:|....:.|:|:||||:..||.||||||:..|.|
  Fly    67 N--------IHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIA 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr47EaNP_610654.1 Chitin_bind_4 56..111 CDD:278791 13/54 (24%)
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439199
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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