DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or47a and Or88a

DIOPT Version :9

Sequence 1:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster


Alignment Length:471 Identity:92/471 - (19%)
Similarity:158/471 - (33%) Gaps:170/471 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSFLQVQKSTIALLGFDLFSENREM----WKR-PYRAMNVFSIAAIFPFILAAVL--------- 51
            |:.||:.|          :|.|..:|    |:| |  ..|....|::.||.|:|.|         
  Fly    12 MEEFLRPQ----------MFQEVAQMVHFQWRRNP--VDNSMVNASMVPFCLSAFLNVLFFGCNG 64

  Fly    52 -----HNW------KNVLLLADAMVALLITILGLFKFSMILYLRRDFKRLIDKFRLLMSNEAEQG 105
                 |.|      :|..:|:   :.:..:|.||     :|||:|                    
  Fly    65 WDIIGHFWLGHPANQNPPVLS---ITIYFSIRGL-----MLYLKR-------------------- 101

  Fly   106 EEYAEILNAANKQ---------DQRMCTLFRTCFL----------LAWALNSVLPLVRMGLSYWL 151
            :|..|.:|..:::         |.:|...:|..:.          |...:..|:|     |:.:|
  Fly   102 KEIVEFVNDLDRECPRDLVSQLDMQMDETYRNFWQRYRFIRIYSHLGGPMFCVVP-----LALFL 161

  Fly   152 AGHAEPELP-----------FPCLFPWNIHIIRNYVLSFIWS---AFASTGVVLPAVSLDTIFCS 202
            ..|...:.|           .||    .:....|:.| .:||   ...:.||        :.|.:
  Fly   162 LTHEGKDTPVAQHEQLLGGWLPC----GVRKDPNFYL-LVWSFDLMCTTCGV--------SFFVT 213

  Fly   203 FTSNLCAFFKIAQYKVVRFKGGSLKESQA-------TLNKVFAL--------YQTSLDMCNDLNQ 252
            | .||   |.:.|..:|...|...::..|       |..|.|.:        .|....:|...|.
  Fly   214 F-DNL---FNVMQGHLVMHLGHLARQFSAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCRKYND 274

  Fly   253 CYQPIICAQFFISSLQLCMLGYLFSITFAQTEGVYYASFIATIIIQAYIY--CYCGENLKTESAS 315
            .::.......|:.:..||.  |||.::......:.....:.|:::..:.:  |..|..|:..|..
  Fly   275 IFKVAFLVSNFVGAGSLCF--YLFMLSETSDVLIIAQYILPTLVLVGFTFEICLRGTQLEKASEG 337

  Fly   316 FEWAIYDSPWHESLGAGGASTSICRSLLISMMRAHRGFRI--TGY-----------FFEANMEAF 367
            .|.::....|:  ||:                |.:|.|.:  |.|           ..:.||..|
  Fly   338 LESSLRSQEWY--LGS----------------RRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHF 384

  Fly   368 SSIVRTAMSYITMLRS 383
            :.|::.|....|.|:|
  Fly   385 TEIMQLAYRLFTFLKS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 69/381 (18%)
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 69/386 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465675
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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