DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or47a and Or24a

DIOPT Version :9

Sequence 1:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:419 Identity:78/419 - (18%)
Similarity:162/419 - (38%) Gaps:77/419 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FLQVQKSTIALLGFDLFSENR-----EMWKRPYRAMNVFSIAAIFPFILAAV---------LHNW 54
            :..|.|..::|:||  :.|.:     ::|             :.|.|.:...         :|..
  Fly    16 YFMVPKFALSLIGF--YPEQKRTVLVKLW-------------SFFNFFILTYGCYAEAYYGIHYI 65

  Fly    55 K-NVLLLADAMVALLITILGLFKFSMILYLRRDFKRLIDKFRLLMSNEAEQ---GEEYAEILNAA 115
            . |:....||:..:..:||.|.|...|.:.:.:.:.||::.|.|...:..:   |.:......|.
  Fly    66 PINIATALDALCPVASSILSLVKMVAIWWYQDELRSLIERVRFLTEQQKSKRKLGYKKRFYTLAT 130

  Fly   116 NKQDQRMCTLFRTCFLLAWALNSVLP--LVRMGLSYWLAGHAEPELPFPCLFPWNIHIIRNYVLS 178
            ......:|..|  |...::::..::.  |.|.....|:.     |.||..:||..:..:..|.::
  Fly   131 QLTFLLLCCGF--CTSTSYSVRHLIDNILRRTHGKDWIY-----ETPFKMMFPDLLLRLPLYPIT 188

  Fly   179 FI---WSAFASTGVVLPAVSLDTIFCSFTSNLCAFFKI------------AQYKVVRFKGGSLKE 228
            :|   |..:.:   |:..|..|..|..|    |.:|.:            .:.:.:.......:|
  Fly   189 YILVHWHGYIT---VVCFVGADGFFLGF----CLYFTVLLLCLQDDVCDLLEVENIEKSPSEAEE 246

  Fly   229 SQAT--LNKVFALYQTSLDMCNDLNQCYQPIICAQFFISSLQLCMLG--YLFSITFAQTEGVYYA 289
            ::..  :.|:...:....::...|:.....|..|.|..|||   ::|  .:..:.|:....:.|.
  Fly   247 ARIVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSL---IIGTSVVDILLFSGLGIIVYV 308

  Fly   290 SFIATIIIQAYIYCYCGENLKTESASFEWAIYDSPWHESLGAGGASTSICRSLLISMMRAHRGFR 354
            .:...:.::.::||..|.::....::...:.:.|.|:      |.|..:.:..|:.:.||.|...
  Fly   309 VYTCAVGVEIFLYCLGGSHIMEACSNLARSTFSSHWY------GHSVRVQKMTLLMVARAQRVLT 367

  Fly   355 ITGYFFEANMEAFSSIVRTAMSYITMLRS 383
            |...||..::|..:||:|...|.|.:.:|
  Fly   368 IKIPFFSPSLETLTSILRFTGSLIALAKS 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 65/342 (19%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 65/342 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465060
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG26277
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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