DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or47a and Or1a

DIOPT Version :10

Sequence 1:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:413 Identity:91/413 - (22%)
Similarity:152/413 - (36%) Gaps:74/413 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQVQKSTIALLGFDLFSENREMWKRPYRAMNVFSIAAIFPF--ILAAVLHNWKNVLLLADAMVAL 67
            |..|:.|.|.:|.||..:.:....|......:..:...|..  :.|.::.|...::|.::|::..
  Fly    12 LWTQRFTFARMGLDLQPDKKGNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHG 76

  Fly    68 LITILGLFKFSMILYLRRDFKRLIDKFRLLMSNEAEQGEEYAEILNAANKQDQRMCTL-FRTC-- 129
            |..:..|.|.::.|....|...||.:.:...:.|...|.|:    .:.|::.|.|..: |..|  
  Fly    77 LQMVSSLLKMAIFLAKSHDLVDLIQQIQSPFTEEDLVGTEW----RSQNQRGQLMAAIYFMMCAG 137

  Fly   130 ----FLLAWALNSVLPLVRMGLSYWLAGHAEPELPFPCLFPWNI---HI------IRNYVLSFIW 181
                |||       :|:....|.|...|...|...|..|.|:::   |:      :..:||||. 
  Fly   138 TSVSFLL-------MPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFF- 194

  Fly   182 SAFASTGVVLPAVSLDTIFCSFTSNLCAFFKIAQYKVVRFKGGSLK---------ESQATLNKVF 237
             ..::|||       ||::     ..||.....||   |..|..||         .|...|:.:|
  Fly   195 -CCSTTGV-------DTLY-----GWCALGVSLQY---RRLGQQLKRIPSCFNPSRSDFGLSGIF 243

  Fly   238 ALYQTSLDMCNDLNQCYQPIICAQFFISSLQLCMLGYLFSITFAQTEGVYYASFIATIIIQAYIY 302
            ..:...|.:....|..:..|...:..|.....|.:...:.:........:...|...:..|..||
  Fly   244 VEHARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYIMPHTNQNFAFLGFFSLVVTTQLCIY 308

  Fly   303 CYCGENLKTESASFEWAIYD-SPW------HESLGAGGASTSICRSLLISMMRAHRGFRITGYFF 360
            .:..|.::.|:..|...:|: .||      |..|            .|..:.||.|...:..|||
  Fly   309 LFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKL------------FLFPIERAQRETVLGAYFF 361

  Fly   361 EANMEAFSSIVRTAMSYITMLRS 383
            |........|.|||.|:.|::.:
  Fly   362 ELGRPLLVWIFRTAGSFTTLMNA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 77/350 (22%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 74/336 (22%)

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