DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13228 and suex-1

DIOPT Version :9

Sequence 1:NP_610645.1 Gene:CG13228 / 36178 FlyBaseID:FBgn0033588 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_495049.2 Gene:suex-1 / 184375 WormBaseID:WBGene00017396 Length:113 Species:Caenorhabditis elegans


Alignment Length:155 Identity:42/155 - (27%)
Similarity:56/155 - (36%) Gaps:73/155 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLVLACAVVSTTPILSSVDE---------ENIRRPRHI-------------GGFGGGGVVGGGIV 50
            |||...|.:    |||:..|         ::::.||::             ||:|||...||  .
 Worm     4 LLVFCLATI----ILSNFTEASADLETASQSLKHPRNLGWKAPEGHREKRYGGWGGGYPYGG--Y 62

  Fly    51 GGGIIGGGGVAAPIVAAPAIQTVPVVSTVPIITTVPVIQTIPSYGYGYGGGYPVGGGLGG-LGGI 114
            ||  .|||                                   ||.||||||  |||.|| .||.
 Worm    63 GG--YGGG-----------------------------------YGGGYGGGY--GGGYGGRYGGN 88

  Fly   115 GGGGFVG-----GAVGFAKFKGGFF 134
            .|....|     .:.|::.:..||:
 Worm    89 YGSSSWGSYSSYSSGGYSSYNSGFW 113



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158909
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.890

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