DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and Mpp2

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_008766350.1 Gene:Mpp2 / 85275 RGDID:620014 Length:569 Species:Rattus norvegicus


Alignment Length:592 Identity:207/592 - (34%)
Similarity:325/592 - (54%) Gaps:63/592 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALSKLISTLKESENLSNDQEID--FLKALLESKELNALVNVHTKVAKVGRDDRLAPVLSTSAQVL 77
            |:.:::..|....|.:...|:|  ||:.::||..:.:|...|.::    .:.:|..|...:.:::
  Rat    28 AMQQVLDNLGSLPNATGAAELDLIFLRGIMESPIVRSLAKAHERL----EETKLEAVRDNNLELV 88

  Fly    78 YEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPVEMDEDEETIKIV 142
            .|:|..|::....:....|...:||:.|.|.||..||::|.|.:     |.|......:.|.   
  Rat    89 QEILRDLAELAEQSSTAAELARILQEPHFQSLLETHDSVASKTY-----ETPPPSPGLDPTF--- 145

  Fly   143 QLVKSNEP-------LTGAQSTE-PIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIE 199
                ||:|       :.|.:.|. ..:|.|.:.  |.|:::||||:|||...:.||:||||.:.|
  Rat   146 ----SNQPVPPDAVRMVGIRKTAGEHLGVTFRV--EGGELVIARILHGGMVAQQGLLHVGDIIKE 204

  Fly   200 VNNINVEGKTPGDVLTILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAG 264
            ||...| |..|..:..:|:::.|::..|::|:..: .....:|.|:.||||:|..|..|||||||
  Rat   205 VNGQPV-GSDPRALQELLRSASGSVILKILPSYQE-PHLPRQVFVKCHFDYDPARDSLIPCKEAG 267

  Fly   265 LAFQRGDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERRILHDRTQKNGTDLDSKPGSCA 329
            |.|..||:|.||.||||.||||.  |.....||||||:.|:|:|....:     .||:..|.| .
  Rat   268 LRFNAGDLLQIVNQDDANWWQAC--HVEGGSAGLIPSQLLEEKRKAFVK-----RDLELTPTS-G 324

  Fly   330 SLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVAKLYPRPGVFR--PI 392
            :||.:..|.               |.|::||..|:|.:|||.::..|||||::.|    ||  .:
  Rat   325 TLCGSLSGK---------------KKKRMMYLTTKNAEFDRHELLIYEEVARMPP----FRRKTL 370

  Fly   393 VLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADIEAGKFVE 457
            |||||.||||..|:.:||..||:::.:.||||:|..:..|..|:.|.||:|.:|:|||.||:::|
  Rat   371 VLIGAQGVGRRSLKNKLILWDPDRYGTTVPYTSRRPKDSEREGQGYSFVSRGEMEADIRAGRYLE 435

  Fly   458 HGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPELDILKATRTEA 522
            ||||:|:||||..:|::.:|.:|.||||..:.||:|.||||:..|:::.::.|:.:.|:|....|
  Rat   436 HGEYEGNLYGTRIDSIRGVVASGKVCVLDVNPQAVKVLRTAEFVPYVVFIEAPDFETLRAMNRAA 500

  Fly   523 RAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQRLENEPV 587
            ....    .:.:..|:.:....::.:.||...|||:||:.|||..|...|.:|...:::|..||.
  Rat   501 LESG----VSTKQLTEADLRRTVEESSRIQRGYGHYFDLSLVNSNLERTFRELQTAMEKLRTEPQ 561

  Fly   588 WAPSMWV 594
            |.|..||
  Rat   562 WVPVSWV 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 11/52 (21%)
L27 75..127 CDD:197794 14/51 (27%)
PDZ_signaling 139..229 CDD:238492 31/97 (32%)
SH3_MPP 243..302 CDD:212796 35/58 (60%)
Guanylate_kin 390..575 CDD:279019 74/186 (40%)
GuKc 399..580 CDD:214504 69/180 (38%)
Mpp2XP_008766350.1 L27 30..83 CDD:197794 12/56 (21%)
L27 85..136 CDD:280918 15/55 (27%)
PDZ_signaling 155..233 CDD:238492 28/80 (35%)
SH3_MPP2 246..304 CDD:212970 36/59 (61%)
Guanylate_kin 366..556 CDD:279019 75/193 (39%)
GuKc 376..557 CDD:214504 69/184 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352366
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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