DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and mpp3b

DIOPT Version :10

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_068080842.1 Gene:mpp3b / 799884 ZFINID:ZDB-GENE-121214-128 Length:611 Species:Danio rerio


Alignment Length:640 Identity:229/640 - (35%)
Similarity:353/640 - (55%) Gaps:103/640 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LSKLISTLKESENLSNDQEIDFLKALLESKELNALVNVHTKVAKVGRDDRL---APVLSTSAQVL 77
            |:.|.|.|....|  :.:::.||:.:...:.|:.|:.:|.::    |...|   .|||.:::.:.
Zfish    14 LALLTSQLHPEAN--HKEDLVFLREVFSERSLSYLMKIHERL----RQFHLYSPTPVLHSASCLA 72

  Fly    78 YEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPVEMDE--DEETIK 140
            .:|.|:| |:..|.:|.:|...||...|::.:|..||.:|||:|.|.||..|.::::  :||::|
Zfish    73 EDVAEEL-QNGSLEEDERELLALLSTPHIKAVLTVHDTVAQKNFEPVLPPLPNDLEDELEEESVK 136

  Fly   141 IVQLVKSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINV 205
            ||:|||:.|||          ||||:.||.:|.:::||||.|||||||||:|||||:.|||...:
Zfish   137 IVRLVKNKEPL----------GATIRRDEVTGAVVVARIMRGGAADRSGLVHVGDELREVNGNLI 191

  Fly   206 EGKTPGDVLTILQNSEGTITFKLVPA-DNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAGLAFQR 269
            ..|.|.::..||..|:|:||.|::|| ..:...:||||.:||.|||.|..|...||:||||.|..
Zfish   192 IHKRPEEISQILSQSQGSITLKIIPAIKEEDRFKESKVYLRALFDYTPYEDRATPCQEAGLPFLC 256

  Fly   270 GDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERRILHDRTQKNGTDLDSKPGSCASLCTT 334
            ||||.:|:|||..||||::..:.:.||||||||..||||:|:  ..|.||.             .
Zfish   257 GDVLQVVSQDDPTWWQAKRVGDSNLRAGLIPSRQFQERRLLY--RMKMGTH-------------Q 306

  Fly   335 PPGSPRLPASSSTSSCRQ------------------PKTKKI-------------------MYDL 362
            .|.|||  |:....:|.:                  ||.|.:                   .:.|
Zfish   307 SPKSPR--ATPCDQTCEKEDCDSESSVSGQHVVVVSPKCKAVAPSCGQAFSWEFYSAGLRRSFRL 369

  Fly   363 TEND-----------DFDREQIATYEEVA----KLYPRPGVFRPIVLIGAPGVGRNELRRRLIAR 412
            :..|           :....:...||||.    :|..:|   |.:||||:.|...|||::::||.
Zfish   370 SRKDHQGSNKESHTPESTENEFLIYEEVTLHQMRLQDKP---RLVVLIGSLGARINELKQKVIAE 431

  Fly   413 DPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIV 477
            :|:::...||:||||.::.|..|.||.|::::..||||::.||:|:||||.:.||||.||::|::
Zfish   432 NPQRYGVAVPHTTRPRKSHEKEGVEYHFISKQAFDADIQSNKFIEYGEYKNNQYGTSLESIRSVL 496

  Fly   478 NAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKP--PELDILKATRTEARAKSTFDEANARSFTDEE 540
            ....||::....:|:|.|||::.||::|.|||  ||:      |....:.::.:..:....|:|:
Zfish   497 ARNKVCLVDVQPEALKILRTSEFKPYVIFVKPRIPEI------RRHRSSPTSPERGDNGHITEED 555

  Fly   541 FEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQRLENEPVWAPSMWVQ 595
            ..||..|||:::..|||..|..|:..:..:|..:|...::|||.||.|.|..||:
Zfish   556 LLDMKHSAEQMEQQYGHLVDRVLIKEDSASACVELRLILERLEREPQWVPVSWVR 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 11/53 (21%)
L27 75..127 CDD:197794 19/51 (37%)
PDZ_MPP3-MPP4-MPP7-like 140..230 CDD:467260 46/89 (52%)
SH3_MPP 243..302 CDD:212796 32/58 (55%)
Guanylate_kin 390..575 CDD:395500 70/186 (38%)
mpp3bXP_068080842.1 L27 11..55 CDD:460717 10/46 (22%)
L27 69..119 CDD:460717 18/50 (36%)
PDZ_MPP3-MPP4-MPP7-like 136..216 CDD:467260 46/89 (52%)
SH3 230..291 CDD:473055 34/60 (57%)
GuKc 424..595 CDD:214504 63/176 (36%)

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