DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and dlg1

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_031757617.1 Gene:dlg1 / 733937 XenbaseID:XB-GENE-1016132 Length:939 Species:Xenopus tropicalis


Alignment Length:634 Identity:169/634 - (26%)
Similarity:275/634 - (43%) Gaps:160/634 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LVNVHTK-VAKVGRDDRLAPVLSTSAQVLYEVLEQLSQHCHLND-----DCKEAFHLLQDSHLQH 108
            |:.|:|. :.:|..:|.:..:.:||..|..:|.:..:.  ::||     |...::....|:|   
 Frog   370 LLAVNTVCLEEVSHEDAVTALKNTSDFVNLKVA
KPTTM--YMNDNYAPPDITNSYSQQVDNH--- 429

  Fly   109 LLFAHDAIAQKDFYPH-LP-------EAPVEMDEDEETIKIVQLVKSNEPLTGAQSTEPIVGATI 165
                   |:...|..| ||       .||..|.||::..:..:.|......||       :|..|
 Frog   430 -------ISPSGFIGHPLPPSPGRYSPAPKGMLEDDDLTREPRKVVLQRGTTG-------LGFNI 480

  Fly   166 KTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLTILQNSEGTITF--KL 228
            ...|:...|.|:.|:.||.||.||.:..||.::.||.::::..|.......|:|:..|:|.  :.
 Frog   481 VGGEDGEGIFISFILAGGPADLSGELQKGDRIMSVNGVDLKSATHEQAAAALKNAGQTVTIVAQY 545

  Fly   229 VP----------------------ADNKGAQRESKVR---VRAHFDYNPDVDPYIPCKEAGLAFQ 268
            .|                      :...|:.|.|:.|   |||.|||:...|..:|.:  ||.|:
 Frog   546 RP
EEYSRFEAKIHDLREQMMNSSISSGSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQ--GLNFK 608

  Fly   269 RGDVLHIVAQDDAYWWQARK--EHERSARAGLIPSRALQERR--------------------ILH 311
            .||:||:|...|..|||||:  ....|...|:|||:...|::                    ..:
 Frog   609 FGDILHVVNASDDEWWQARQVTADGESEEIGVIPSKRRVEKKERARLKTVKFNSKARGDKGQSFN 673

  Fly   312 DRTQKN------------------GTDLDSKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKI 358
            |:.:||                  .:|:|....|              .||.|.||         
 Frog   674 DKRKKNLFSRKFPFYKNKDQSEMETSDVDQHVTS--------------NASDSESS--------- 715

  Fly   359 MYDLTENDDF------DREQIATYEEVAKLYPRPGVFRPIVLIGAPGVGRNELRRRLIARDPEKF 417
             |.:...|::      ..|.:.:||.|.:  ......||::::|..   ::.:...||:..||||
 Frog   716 -YLILITDEYGCSQGGQEEYVLSYEPVNQ--QEVNYSRPVIILGPT---KDRVNDDLISEFPEKF 774

  Fly   418 RSPVPYTTRPMRTGEVAGREYIFV-AREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGC 481
            .|.||:||||.|..|:.||:|.|| :||:|:.||:..:|:|.|:|..||||||.:|||.:...|.
 Frog   775 GSCVPHTTRPKRDYEIDGRDYHFVTSREQMEKDIQDHRFIEAGQYNSHLYGTSVQSVKEVAERGK 839

  Fly   482 VCVLSPHYQAIKTLRTAQLKPFLIHVKPPELD-ILKATR--TEARAKSTFDEANARSFTDEEFED 543
            .|:|.....|||.|:.|||.|..|.:||..:: |::.::  ||.:.:.|::.|..   .::||.:
 Frog   840 HCILDVSGNAIKRLQIAQLYPIAIFIKPKSVENIIEMSKRVTEEQGRKTYERAMK---LEQEFTE 901

  Fly   544 MIKSAERIDFLYGHFFDVELVNGE-LVNAFEQLVQNVQRLENEPVWAPS 591
                         ||  ..:|.|: |...:.|:.|.::...:..:|.|:
 Frog   902 -------------HF--TAIVQGDTLEEIYNQIKQIIEEQSSTFIWVPA 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 5/18 (28%)
L27 75..127 CDD:197794 12/64 (19%)
PDZ_signaling 139..229 CDD:238492 24/91 (26%)
SH3_MPP 243..302 CDD:212796 27/63 (43%)
Guanylate_kin 390..575 CDD:279019 67/189 (35%)
GuKc 399..580 CDD:214504 66/185 (36%)
dlg1XP_031757617.1 L27_1 2..62 CDD:401120
MAGUK_N_PEST 106..222 CDD:402306
PDZ_signaling 223..307 CDD:238492
PDZ_signaling 316..402 CDD:238492 8/31 (26%)
PDZ_assoc 403..465 CDD:402299 15/73 (21%)
PDZ 463..547 CDD:214570 24/90 (27%)
SH3_DLG1 582..648 CDD:212964 28/67 (42%)
Guanylate_kin 748..926 CDD:395500 69/198 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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