DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and Mpp2

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001343253.1 Gene:Mpp2 / 50997 MGIID:1858257 Length:569 Species:Mus musculus


Alignment Length:592 Identity:206/592 - (34%)
Similarity:324/592 - (54%) Gaps:63/592 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALSKLISTLKESENLSNDQEID--FLKALLESKELNALVNVHTKVAKVGRDDRLAPVLSTSAQVL 77
            |:.:::..|....|.:...|:|  ||:.::||..:.:|...|.::    .:.:|..|...:.:::
Mouse    28 AMQQVLDNLGSLPNATGAAELDLIFLRGIMESPIVRSLAKAHERL----EETKLEAVRDNNLELV 88

  Fly    78 YEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPVEMDEDEETIKIV 142
            .|:|..|::....:....|...:||:.|.|.||..||::|.|.:     |.|......:.|.   
Mouse    89 QEILRDLAELAEQSSTAAELARILQEPHFQSLLETHDSVASKTY-----ETPPPSPGLDPTF--- 145

  Fly   143 QLVKSNEP-------LTGAQSTE-PIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIE 199
                ||:|       :.|.:.|. ..:|.|.:.  |.|:::||||:|||...:.||:||||.:.|
Mouse   146 ----SNQPVPPDAVRMVGIRKTAGEHLGVTFRV--EGGELVIARILHGGMVAQQGLLHVGDIIKE 204

  Fly   200 VNNINVEGKTPGDVLTILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAG 264
            ||...| |..|..:..:|:::.|::..|::|:..: .....:|.|:.||||:|..|...||||||
Mouse   205 VNGQPV-GSDPRALQELLRSASGSVILKILPSYQE-PHLPRQVFVKCHFDYDPARDSLSPCKEAG 267

  Fly   265 LAFQRGDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERRILHDRTQKNGTDLDSKPGSCA 329
            |.|..||:|.||.||||.||||.  |.....||||||:.|:|:|....:     .||:..|.| .
Mouse   268 LRFNAGDLLQIVNQDDANWWQAC--HVEGGSAGLIPSQLLEEKRKAFVK-----RDLELTPTS-G 324

  Fly   330 SLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVAKLYPRPGVFR--PI 392
            :||.:..|.               |.|::||..|:|.:|||.::..|||||::.|    ||  .:
Mouse   325 TLCGSLSGK---------------KKKRMMYLTTKNAEFDRHELLIYEEVARMPP----FRRKTL 370

  Fly   393 VLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADIEAGKFVE 457
            |||||.||||..|:.:||..||:::.:.||||:|..:..|..|:.|.||:|.:|:|||.||:::|
Mouse   371 VLIGAQGVGRRSLKNKLILWDPDRYGTTVPYTSRRPKDSEREGQGYSFVSRGEMEADIRAGRYLE 435

  Fly   458 HGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPELDILKATRTEA 522
            ||||:|:||||..:|::.:|.:|.||||..:.||:|.||||:..|:::.::.|:.:.|:|....|
Mouse   436 HGEYEGNLYGTRIDSIRGVVASGKVCVLDVNPQAVKVLRTAEFVPYVVFIEAPDYETLRAMNRAA 500

  Fly   523 RAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQRLENEPV 587
            ....    .:.:..|:.:....::.:.||...|||:||:.|||..|...|.:|...:::|..||.
Mouse   501 LESG----VSTKQLTEADLRRTVEESSRIQRGYGHYFDLSLVNSNLERTFRELQTAMEKLRTEPQ 561

  Fly   588 WAPSMWV 594
            |.|..||
Mouse   562 WVPVSWV 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 11/52 (21%)
L27 75..127 CDD:197794 14/51 (27%)
PDZ_signaling 139..229 CDD:238492 31/97 (32%)
SH3_MPP 243..302 CDD:212796 34/58 (59%)
Guanylate_kin 390..575 CDD:279019 74/186 (40%)
GuKc 399..580 CDD:214504 69/180 (38%)
Mpp2NP_001343253.1 L27 30..83 CDD:197794 12/56 (21%)
L27 85..136 CDD:308467 15/55 (27%)
PDZ_signaling 155..233 CDD:238492 28/80 (35%)
SH3_MPP2 246..304 CDD:212970 35/59 (59%)
GuKc 376..557 CDD:214504 69/184 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848771
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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