DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and guk1b

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_957018.1 Gene:guk1b / 393697 ZFINID:ZDB-GENE-020916-1 Length:223 Species:Danio rerio


Alignment Length:228 Identity:61/228 - (26%)
Similarity:109/228 - (47%) Gaps:45/228 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 RPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGE---------------------- 432
            ||:||.|..|.|::.|.:||:......|...|.:|||..|.||                      
Zfish     5 RPVVLSGPSGAGKSTLLKRLMKEYEGVFGFSVSHTTRNPRPGEEDGKGLNCLPMLLGATLLPVAD 69

  Fly   433 ----VAGREYIFVAREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIK 493
                |...:|.||.:|||...|:..:|:|:.|:.|::||||..|::.:.....:|:|....|.::
Zfish    70 VLSSVTSEDYHFVTKEKMQEGIDKDEFIENAEFSGNMYGTSKSSIEDVQAQNLICILDVDIQGVR 134

  Fly   494 TLRTAQLKPFLIHVKPPELDILKATRTEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGH- 557
            .::...|.|..|.::||.::||     |.|.:....|      |::..:..:::| |||..... 
Zfish   135 NIKKTDLNPIYISIQPPSMEIL-----EKRLRDRQTE------TEDSLQKRLEAA-RIDMELSKE 187

  Fly   558 --FFDVELVNGELVNAFEQ----LVQNVQRLEN 584
              .||:.:||.:|..|:|:    |::.::::::
Zfish   188 PGVFDIVIVNDDLEEAYEKLKSVLIEEIEKVQD 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794
L27 75..127 CDD:197794
PDZ_signaling 139..229 CDD:238492
SH3_MPP 243..302 CDD:212796
Guanylate_kin 390..575 CDD:279019 60/217 (28%)
GuKc 399..580 CDD:214504 56/213 (26%)
guk1bNP_957018.1 Gmk 1..219 CDD:223272 61/225 (27%)
guanyl_kin 5..213 CDD:213788 61/219 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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