DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and Dlg4

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_062567.1 Gene:Dlg4 / 29495 RGDID:68424 Length:724 Species:Rattus norvegicus


Alignment Length:611 Identity:161/611 - (26%)
Similarity:262/611 - (42%) Gaps:166/611 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LKALLESKELNALVN----VHTKVAKVGR----DDRLAPVLSTSAQVLYEVLEQLSQHCHLNDDC 94
            |:.::....:.||.|    |:.||||...    |....|.::||          .||  ||:::.
  Rat   220 LEDVMHEDAVAALKNTYDVVYLKVA
KPSNAYLSDSYAPPDITTS----------YSQ--HLDNEI 272

  Fly    95 KEAFHLLQD--------SHLQHLLFAHDAIAQKDFYPHLPEAPVEMDEDEETIKIVQLVKSNEPL 151
            ..:.:|..|        |..::...|.|.:.::|    :|..|             :.:..:...
  Rat   273 SHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEED----IPREP-------------RRIVIHRGS 320

  Fly   152 TGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLTI 216
            ||       :|..|...|:...|.|:.|:.||.||.||.:..||:::.||.:::...:.......
  Rat   321 TG-------LGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIA 378

  Fly   217 LQNSEGTITFKLVPADNKGAQRESKVR---------------------------VRAHFDYNPDV 254
            |:|:..|:|........:.::.|:|:.                           :||.|||:...
  Rat   379 LKNAGQTVTIIAQYKP
EEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRALFDYDKTK 443

  Fly   255 DPYIPC--KEAGLAFQRGDVLHIVAQDDAYWWQARKEHERSAR--AGLIPSRALQERRILHDRTQ 315
            |    |  ....|:|:.|||||::...|..|||||:.|..|..  .|.|||:...|||       
  Rat   444 D----CGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERR------- 497

  Fly   316 KNGTDLDSKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVA 380
             ..:.|.:|..                .|||.|..|:                  :.:.:||.|.
  Rat   498 -EWSRLKAKDW----------------GSSSGSQGRE------------------DSVLSYETVT 527

  Fly   381 KL---YPRPGVFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFV- 441
            ::   |.     |||:::|..   ::.....|::..|:||.|.||:||||.|..|:.||:|.|| 
  Rat   528 QMEVHYA-----RPIIILGPT---KDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVS 584

  Fly   442 AREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIH 506
            :||||:.||:|.||:|.|:|..||||||.:||:.:...|..|:|.....|::.|:.|.|.|..|.
  Rat   585 SREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANAVRRLQAAHLHPIAIF 649

  Fly   507 VKPPELD-ILKATR--TEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGEL 568
            ::|..|: :|:..:  ||.:|:..||.|..   .::||.:...:               :|.|: 
  Rat   650 IRPRSLENVLEINKRITEEQARKAFDRATK---LEQEFTECFSA---------------IVEGD- 695

  Fly   569 VNAFEQLVQNVQRLENEPVWAPSMWV 594
              :||::...|:|: .|.:..|.:||
  Rat   696 --SFEEIYHKVKRV-IEDLSGPYIWV 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 10/37 (27%)
L27 75..127 CDD:197794 10/59 (17%)
PDZ_signaling 139..229 CDD:238492 22/89 (25%)
SH3_MPP 243..302 CDD:212796 25/89 (28%)
Guanylate_kin 390..575 CDD:279019 66/188 (35%)
GuKc 399..580 CDD:214504 62/184 (34%)
Dlg4NP_062567.1 MAGUK_N_PEST 10..64 CDD:287565
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..35
PDZ 65..149 CDD:278991
PDZ 160..244 CDD:278991 6/23 (26%)
PDZ_assoc 245..312 CDD:287558 17/95 (18%)
PDZ 310..394 CDD:214570 23/103 (22%)
SH3_DLG4 430..495 CDD:212963 26/68 (38%)
Guanylate_kin 533..711 CDD:279019 70/207 (34%)
GuKc 544..710 CDD:214504 64/187 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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