DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and Dlg2

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_006507830.1 Gene:Dlg2 / 23859 MGIID:1344351 Length:1027 Species:Mus musculus


Alignment Length:616 Identity:170/616 - (27%)
Similarity:262/616 - (42%) Gaps:154/616 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 VGRDDRLAPVLSTSAQVLYEVLEQL-----SQHCHLNDDCKEAF---------H--LLQD----S 104
            :|.||...|     .:.:|..:.:|     |...:...:|.::|         |  ||.|    |
Mouse   478 LGEDDYTRP-----PE
PVYSTVNKLCDKPASPRHYSPVECDKSFLLSTPYPHYHLGLLPDSDMTS 537

  Fly   105 HLQHLLFAHDAIAQKDFYPHLPEAPVE--MDEDEETIKIVQLVKSNEPLTGAQSTEPIVGATIKT 167
            |.||      :.|.:.     |...::  :..:.|..|:| |.|.:   ||       :|..|..
Mouse   538 HSQH------STATRQ-----PSVTLQRAISLEGEPRKVV-LHKGS---TG-------LGFNIVG 580

  Fly   168 DEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLTILQNSEGTITF--KLVP 230
            .|:...|.::.|:.||.||.||.:..||:::.||.|::.|.:.......|:.:..|:|.  :..|
Mouse   581 GEDGEGIFVSFILAGGPADLSGELQRGDQILSVNGIDLRGASHEQAAAALKGAGQTVTIIAQYQP 645

  Fly   231 AD----------------------NKGAQRESKVR---VRAHFDYNPDVDPYIPCKEAGLAFQRG 270
            .|                      ..|:.|.::.|   |||.|||:...|..:|.:  ||:|:.|
Mouse   646 EDYARFEAKIHDLREQMMNHSMSSGSGSLRTNQKRSLYVRAMFDYDKSKDSGLPSQ--GLSFKYG 708

  Fly   271 DVLHIVAQDDAYWWQARKE--HERSARAGLIPSRALQERRILHDRTQKNGTDLDSKPGSCASL-- 331
            |:||::...|..|||||:.  ...|...|:|||:...||:   :|.:......::|||...|.  
Mouse   709 DILHVINASDDEWWQARRVTLDGDSEEMGVIPSKRRVERK---ERARLKTVKFNAKPGVIDSKGS 770

  Fly   332 ---------------------------CTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFD 369
                                       .:.|.......||.|.||||..:      ||       
Mouse   771 FNDKRKKSFIFSRKFPFYKNKEQSEQETSDPEQHVSSNASDSESSCRGQE------DL------- 822

  Fly   370 REQIATYEEVAKLYPRPGVFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVA 434
               |.:||.|.:  ......||::::|..   ::.:...||:..|:||.|.||:||||.|..||.
Mouse   823 ---ILSYEPVTR--QEINYTRPVIILGPM---KDRINDDLISEFPDKFGSCVPHTTRPKRDYEVD 879

  Fly   435 GREYIFV-AREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTA 498
            ||:|.|| :||:|:.||:..||:|.|:|..:|||||.:||:.:...|..|:|.....|||.|:.|
Mouse   880 GRDYHFVISREQMEKDIQEHKFIEAGQYNDNLYGTSVQSVRFVAERGKHCILDVSGNAIKRLQVA 944

  Fly   499 QLKPFLIHVKPPELDILKATR---TEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFD 560
            ||.|..|.:||..|:.|....   ||.:||.|:|.|             ||..:.    :|.:|.
Mouse   945 QLYPIAIFIKPKSLEPLMEMNKRLTEEQAKKTYDRA-------------IKLEQE----FGEYFT 992

  Fly   561 VELVNGELVNAFEQLVQNVQRLENEPVWAPS 591
            ..:....|.:.:.|....::......:|.||
Mouse   993 AIVQGDTLEDIYNQCKLVIEEQSGPFIWIPS 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 3/7 (43%)
L27 75..127 CDD:197794 14/71 (20%)
PDZ_signaling 139..229 CDD:238492 26/91 (29%)
SH3_MPP 243..302 CDD:212796 26/63 (41%)
Guanylate_kin 390..575 CDD:279019 68/188 (36%)
GuKc 399..580 CDD:214504 66/184 (36%)
Dlg2XP_006507830.1 L27_1 4..63 CDD:370268
MAGUK_N_PEST 158..240 CDD:371162
PDZ_signaling 241..325 CDD:238492
PDZ_signaling 334..419 CDD:238492
PDZ_assoc 421..488 CDD:371157 4/14 (29%)
PDZ_signaling 562..640 CDD:238492 26/88 (30%)
SH3_DLG2 677..750 CDD:212965 29/77 (38%)
Guanylate_kin 836..1014 CDD:366206 69/197 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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