DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and PDZD2

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_005248326.1 Gene:PDZD2 / 23037 HGNCID:18486 Length:2873 Species:Homo sapiens


Alignment Length:512 Identity:91/512 - (17%)
Similarity:159/512 - (31%) Gaps:187/512 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 PHLPEAPVEMDEDEETIKIVQLVKSNEPLTGA--------------QSTEPI----VGATIKTD- 168
            |||..:.|:...:.      ::.|::.|||.:              ||::.:    ||...|.: 
Human   279 PHLERSEVDRGTEH------RIPKTDAPLTTSNDKRRFSKGGKTDFQSSDCLAREEVGRIWKMEL 337

  Fly   169 --EESG----------------KIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLT 215
              |..|                .|::.::..||||.|.|.:.:|||::.:|...:.|.:..:.:.
Human   338 LKESDGLGIQVSGGRGSKRSPHAIVVTQVKEGGAAHRDGRLSLGDELLVINGHLLVGLSHEEAVA 402

  Fly   216 ILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAGLAFQRGDVLHIVAQDD 280
            ||:::.|.:...:...:|..   |..:|:.:  ...||:...:                    :|
Human   403 ILRSATGMVQLVVASKENSA---EDLLRLTS--KSLPDLTSSV--------------------ED 442

  Fly   281 AYWWQARKEHERSARAGLIPSRALQERRILHDRTQKNGTDLDSKPGSCASLCTTPPGSPR----L 341
            ...|...::.|                           .|.:...|:.:|:....||:..    .
Human   443 VSSWTDNEDQE---------------------------ADGEEDEGTSSSVQRAMPGTDEPQDVC 480

  Fly   342 PASSSTSSCRQPK--TKKIMYDLTENDDFDR-EQIATYEEVAKLYPRPGVFRPIVLIGAPGVGRN 403
            .|..|..:...||  :.||......:....| |.:..|.|:            :|..|.|     
Human   481 GAEESKGNLESPKQGSNKIKLKSRLSGGVHRLESVEEYNEL------------MVRNGDP----- 528

  Fly   404 ELRRRLIARDPEKFRSP--------------VPYTTRPMRTGEV--------------------- 433
            .:|...::||..|...|              |..:||.:.|.:|                     
Human   529 RIRMLEVSRDGRKHSLPQLLDSSSASQEYHIVKKSTRSLSTTQVESPWRLIRPSVISIIGLYKEK 593

  Fly   434 ---------AGREYIFVAREKMDADIEA----GKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVL 485
                     .||:.|   |.:|...::.    |...|.|..|   .|.....|..|...|.....
Human   594 GKGLGFSIAGGRDCI---RGQMGIFVKTIFPNGSAAEDGRLK---EGDEILDVNGIPIKGLTFQE 652

  Fly   486 SPH-YQAIK------TLRTAQLKPFLIHVKPPELDILKATRTEARAKSTFDEANARS 535
            :.| ::.|:      |:||..:.|.|.....|       |.....|...|:.:...|
Human   653 AIHTFKQIRSGLFVLTVRTKLVSPSLTPCSTP-------THMSRSASPNFNTSGGAS 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794
L27 75..127 CDD:197794 3/3 (100%)
PDZ_signaling 139..229 CDD:238492 26/126 (21%)
SH3_MPP 243..302 CDD:212796 6/58 (10%)
Guanylate_kin 390..575 CDD:279019 38/201 (19%)
GuKc 399..580 CDD:214504 35/192 (18%)
PDZD2XP_005248326.1 PDZ_signaling 335..416 CDD:238492 17/80 (21%)
PDZ_signaling 589..670 CDD:238492 16/86 (19%)
PDZ_signaling 726..810 CDD:238492
PDZ_signaling 2623..2694 CDD:238492
PDZ 2785..2867 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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