DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and Mpp4

DIOPT Version :10

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_001158154.1 Gene:Mpp4 / 227157 MGIID:2386681 Length:654 Species:Mus musculus


Alignment Length:641 Identity:226/641 - (35%)
Similarity:340/641 - (53%) Gaps:92/641 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DP--ALSKLISTLKESENLSNDQEID---FLKALLESKELNALVNVHTKVAKVGRDDRLAPVLST 72
            ||  .||.::..|.:..:|...::::   .|..||.|..|.||:.|:..:.:. ::.:|.|. :|
Mouse    41 DPENGLSGILRLLLQELSLFYSRDVNGLCLLYDLLHSPWLQALLKVYDCLQRF-KEKKLVPD-TT 103

  Fly    73 SAQVL-YEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPVEMDEDE 136
            .||:| .||||.|.: ...:.:.:|...:||..|.:.||.|||.:|||||.|.||..|..:.:.|
Mouse   104 HAQILACEVLELLPK-ASGSPEIQELRQVLQAPHCKALLSAHDTVAQKDFEPLLPPLPDNIPDSE 167

  Fly   137 ETIKIVQLVKSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVN 201
            |.::||.|||:.:||          |||||..|.:|.|::||::|||..:||||::.||:::|||
Mouse   168 EAMRIVCLVKNQQPL----------GATIKRHEITGDILVARVIHGGLVERSGLLYAGDKLVEVN 222

  Fly   202 NINVEGKTPGDVLTILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAGLA 266
            .::|||..|..|:.||..|.|||.||::|........:..|.|||..||.|..||.|||.:|||.
Mouse   223 GVSVEGLDPEQVIHILAMSCGTIMFKVIPVSAPPVSSQKMVYVRAMIDYWPQEDPDIPCMDAGLP 287

  Fly   267 FQRGDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERRILHDRTQKNGTDLDSKPGSCASL 331
            |.:||:|.||.|:||.||||||..:.:..||||||..|.:|     :.::.......:|.:|.. 
Mouse   288 FLKGDILQIVDQNDALWWQARKISDLTICAGLIPSNHLLKR-----KQREFWWSQPYQPHTCLK- 346

  Fly   332 CTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDD--FDREQI--------------------- 373
                        |:...|..:..:.||.....|.|:  |:.|::                     
Mouse   347 ------------STRALSMEEEDSMKIDEKCVEADEETFESEELAEAKDEFVGDGQKFFIAGFRR 399

  Fly   374 -----------------------------ATYEEVAKLYPRPG-VFRPIVLIGAPGVGRNELRRR 408
                                         |.||||.:...:|. ..|.|||:|..|||.|||||:
Mouse   400 SMRLCRRKSHFSQLHASLCCSCSCYSAVGAPYEEVVRYQRQPADKHRLIVLVGPSGVGVNELRRQ 464

  Fly   409 LIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADIEAGKFVEHGEYKGHLYGTSAESV 473
            ||..:|..|:|.||:|||..::.|:.||||.:|:||..::.:...|.:|:|||||||||||..:|
Mouse   465 LIGCNPSCFQSAVPHTTRFPKSYEMDGREYHYVSRETFESLMYGHKMLEYGEYKGHLYGTSVNAV 529

  Fly   474 KSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPELDILKATRTEARAKSTFDEANARSFTD 538
            .::::.|.:|::....|.|::.||..|||::|.:|||....::.:|  ..||.|.|......|.|
Mouse   530 HAVLDEGKICIMDLEPQDIQSARTRDLKPYVIFIKPPNTSSMRHSR--KNAKITTDYYVDMKFKD 592

  Fly   539 EEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQRLENEPVWAPSMWV 594
            |:.::|.:.|::::..:|.|||..:||..|.:|..||:..:|:.:.|..|.|..||
Mouse   593 EDLQEMEELAQKMESQFGQFFDHVIVNDNLQDACGQLLSAIQKAQEELQWVPEAWV 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 12/53 (23%)
L27 75..127 CDD:197794 23/52 (44%)
PDZ_MPP3-MPP4-MPP7-like 140..230 CDD:467260 42/89 (47%)
SH3_MPP 243..302 CDD:212796 34/58 (59%)
Guanylate_kin 390..575 CDD:395500 76/184 (41%)
Mpp4NP_001158154.1 L27 <66..100 CDD:197794 9/34 (26%)
L27 108..154 CDD:460717 20/46 (43%)
PDZ_MPP3-MPP4-MPP7-like 171..251 CDD:467260 42/89 (47%)
SH3_MPP4 264..324 CDD:212967 35/59 (59%)
Guanylate_kin 446..636 CDD:395500 79/191 (41%)

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