DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and magu-1

DIOPT Version :10

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_497201.1 Gene:magu-1 / 190302 WormBaseID:WBGene00021914 Length:567 Species:Caenorhabditis elegans


Alignment Length:618 Identity:193/618 - (31%)
Similarity:290/618 - (46%) Gaps:138/618 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KLISTLKESENLSNDQEIDFLKALLESKELNALVNVHTKVAKVGRDD-RLAPVLSTSAQVLYEVL 81
            |.:|.|:........|||.|       :||:..|          .|| .::.:.|:|.|.|.|  
 Worm    42 KAVSILRNFSTNDQKQEISF-------QELSQNV----------LDDWDISNIKSSSVQQLVE-- 87

  Fly    82 EQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPVEMDEDE-ETIKIVQLV 145
                              ||....:|.:|:|...|:...|.|.||:.|.|:|||: ..:|||::|
 Worm    88 ------------------LLNLPRVQGVLWAAQEISAGRFAPQLPDVPFEVDEDDGVAVKIVRIV 134

  Fly   146 KSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTP 210
            :..|||          |||||.  |.||:.:||||..|.|||||.|..||.|:|||.|.|..|.|
 Worm   135 RRGEPL----------GATIKC--ERGKVYVARIMANGVADRSGCIQEGDRVLEVNGITVADKEP 187

  Fly   211 GDVLTILQNSE-GTITFKLVPAD--NKGAQRESKVR-VRAHFDYNPDVDPYIPCKEAGLAFQRGD 271
            .:::.:|...: |.|||||:||:  .|..|::|..| .||.|||:|..|...||.||.::|:.||
 Worm   188 REIVKLLDKCDNGIITFKLIPAEINQKLKQKKSSHRYARALFDYDPWQDKRHPCPEAAISFRGGD 252

  Fly   272 VLHIVAQDDAYWWQARK----------------EHERSARAGLIPSRALQERRILHDRTQKNGTD 320
            :|.|:.:.|.||||.||                ..:.|.:.||:||..||    ......:||.|
 Worm   253 ILEILDEKDQYWWQTRKIGFGALARRKESHDDENRDDSKKVGLVPSEWLQ----CQSEIPENGID 313

  Fly   321 LDSKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDF----DREQIATYEEVAK 381
                                                       .:|||    :..:...||.|.:
 Worm   314 -------------------------------------------TSDDFQSFLENHKGRFYESVFR 335

  Fly   382 LYPRPGVFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKM 446
            ...:....|.:||:|||||||||:||:......::|.:.:|:|:||.|..|..|..|.|.:|.:|
 Worm   336 WRNKKKRRRVVVLLGAPGVGRNEIRRQFFKVFADRFTNAIPHTSRPQRPNESDGVNYYFTSRSEM 400

  Fly   447 DADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPE 511
            :..||..:.:|:||::.:||||:.:||:.....|.| :|:||..||:.:||.:..|.:|.|:|||
 Worm   401 ERMIERKEMLEYGEFRDNLYGTALKSVRKASEKGTV-LLTPHPLAIENIRTWEFAPIVIFVQPPE 464

  Fly   512 LDILKATRTEARAKSTFDE---------------ANARSFTDEEFEDMIKSAERIDFLYGHFFDV 561
            ....|.||...|:::|...               :.||:|:|.|...:|.::.:::..|..:.|.
 Worm   465 FGEFKHTREVYRSQTTRSHSAASSSNISQNTAATSAARAFSDVEIRQIIDNSAQMEQKYRGYCDA 529

  Fly   562 ELVNGELVNAFEQLVQNVQRLENEPVWAPSMWV 594
            .:.|.:|.....:|...:.:||::..|.|..|:
 Worm   530 IIRNVDLDTTMNELTGLIYQLESKATWMPMKWL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 12/50 (24%)
L27 75..127 CDD:197794 12/51 (24%)
PDZ_MPP3-MPP4-MPP7-like 140..230 CDD:467260 43/90 (48%)
SH3_MPP 243..302 CDD:212796 28/75 (37%)
Guanylate_kin 390..575 CDD:395500 67/199 (34%)
magu-1NP_497201.1 PDZ_MPP3-MPP4-MPP7-like 129..208 CDD:467260 43/90 (48%)
SH3_MPP 224..300 CDD:212796 28/75 (37%)
Guanylate_kin 348..550 CDD:395500 66/202 (33%)

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