DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and magu-1

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_497201.1 Gene:magu-1 / 190302 WormBaseID:WBGene00021914 Length:567 Species:Caenorhabditis elegans


Alignment Length:618 Identity:193/618 - (31%)
Similarity:290/618 - (46%) Gaps:138/618 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KLISTLKESENLSNDQEIDFLKALLESKELNALVNVHTKVAKVGRDD-RLAPVLSTSAQVLYEVL 81
            |.:|.|:........|||.|       :||:..|          .|| .::.:.|:|.|.|.|  
 Worm    42 KAVSILRNFSTNDQKQEISF-------QELSQNV----------LDDWDISNIKSSSVQQLVE-- 87

  Fly    82 EQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPVEMDEDE-ETIKIVQLV 145
                              ||....:|.:|:|...|:...|.|.||:.|.|:|||: ..:|||::|
 Worm    88 ------------------LLNLPRVQGVLWAAQEISAGRFAPQLPDVPFEVDEDDGVAVKIVRIV 134

  Fly   146 KSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTP 210
            :..|||          |||||.  |.||:.:||||..|.|||||.|..||.|:|||.|.|..|.|
 Worm   135 RRGEPL----------GATIKC--ERGKVYVARIMANGVADRSGCIQEGDRVLEVNGITVADKEP 187

  Fly   211 GDVLTILQNSE-GTITFKLVPAD--NKGAQRESKVR-VRAHFDYNPDVDPYIPCKEAGLAFQRGD 271
            .:::.:|...: |.|||||:||:  .|..|::|..| .||.|||:|..|...||.||.::|:.||
 Worm   188 REIVKLLDKCDNGIITFKLIPAEINQKLKQKKSSHRYARALFDYDPWQDKRHPCPEAAISFRGGD 252

  Fly   272 VLHIVAQDDAYWWQARK----------------EHERSARAGLIPSRALQERRILHDRTQKNGTD 320
            :|.|:.:.|.||||.||                ..:.|.:.||:||..||    ......:||.|
 Worm   253 ILEILDEKDQYWWQTRKIGFGALARRKESHDDENRDDSKKVGLVPSEWLQ----CQSEIPENGID 313

  Fly   321 LDSKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDF----DREQIATYEEVAK 381
                                                       .:|||    :..:...||.|.:
 Worm   314 -------------------------------------------TSDDFQSFLENHKGRFYESVFR 335

  Fly   382 LYPRPGVFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKM 446
            ...:....|.:||:|||||||||:||:......::|.:.:|:|:||.|..|..|..|.|.:|.:|
 Worm   336 WRNKKKRRRVVVLLGAPGVGRNEIRRQFFKVFADRFTNAIPHTSRPQRPNESDGVNYYFTSRSEM 400

  Fly   447 DADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPE 511
            :..||..:.:|:||::.:||||:.:||:.....|.| :|:||..||:.:||.:..|.:|.|:|||
 Worm   401 ERMIERKEMLEYGEFRDNLYGTALKSVRKASEKGTV-LLTPHPLAIENIRTWEFAPIVIFVQPPE 464

  Fly   512 LDILKATRTEARAKSTFDE---------------ANARSFTDEEFEDMIKSAERIDFLYGHFFDV 561
            ....|.||...|:::|...               :.||:|:|.|...:|.::.:::..|..:.|.
 Worm   465 FGEFKHTREVYRSQTTRSHSAASSSNISQNTAATSAARAFSDVEIRQIIDNSAQMEQKYRGYCDA 529

  Fly   562 ELVNGELVNAFEQLVQNVQRLENEPVWAPSMWV 594
            .:.|.:|.....:|...:.:||::..|.|..|:
 Worm   530 IIRNVDLDTTMNELTGLIYQLESKATWMPMKWL 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 12/50 (24%)
L27 75..127 CDD:197794 12/51 (24%)
PDZ_signaling 139..229 CDD:238492 42/90 (47%)
SH3_MPP 243..302 CDD:212796 28/75 (37%)
Guanylate_kin 390..575 CDD:279019 67/199 (34%)
GuKc 399..580 CDD:214504 62/195 (32%)
magu-1NP_497201.1 PDZ_signaling 128..201 CDD:238492 37/84 (44%)
SH3_MPP 224..300 CDD:212796 28/75 (37%)
Guanylate_kin 348..550 CDD:279019 66/202 (33%)
NK 353..543 CDD:302627 61/190 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167741
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1455
Inparanoid 1 1.050 261 1.000 Inparanoid score I1912
Isobase 1 0.950 - 0 Normalized mean entropy S2832
OMA 1 1.010 - - QHG49437
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 1 1.000 - - otm14388
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23122
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5259
SonicParanoid 1 1.000 - - X2258
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.850

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