DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and magu-3

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:NP_491260.2 Gene:magu-3 / 183676 WormBaseID:WBGene00016841 Length:479 Species:Caenorhabditis elegans


Alignment Length:616 Identity:152/616 - (24%)
Similarity:240/616 - (38%) Gaps:181/616 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LSKLISTLKESENLSNDQEIDFLKALLESKELNALVNVHTKVAKVGRDDRLAPVLSTSAQVLYEV 80
            ||:|.|   .:||||.     .|..|||..|     |:..|..|....|......::|:      
 Worm     7 LSQLRS---NAENLSR-----CLHVLLEKIE-----NIEKKNGKEQDADSTKSNGTSSS------ 52

  Fly    81 LEQLSQHCHLNDDCKEAFHLLQDSHLQHL----------LFAHDAIAQKDFYPHLPEAPVEMDED 135
                      |.|.||.|..::......:          :.....:..|.|:      .:.:|..
 Worm    53 ----------NKDGKEKFEQVEIEEKTEIDPKTGLKKRTIVTERVLTTKTFH------ALALDGP 101

  Fly   136 EETIKIVQLVKSNEPLTGAQSTE-----PIVGATI--------KTDEESGKIIIARI-MHGGAAD 186
            ..|:         .|:..:..|:     ||..:.|        ||..::|::....: .|||.. 
 Worm   102 SPTM---------TPILRSSGTKNHNYAPIHQSAILLPQYQSRKTTVDAGQLTQVEVEKHGGQL- 156

  Fly   187 RSGLIHVGDEVIEVNNINVEGKTPGDVLT-----------ILQNSEGTITFKLVPADNKGAQRES 240
                  |..::.|.:|.:::   ||||:|           .::|.:|.:...:.||....|....
 Worm   157 ------VVTKINEKSNYDLK---PGDVITQVDGKDVYFRADIENLKGKVELTVEPAGIHCAPANF 212

  Fly   241 KVRVRAHFDYNPDVDPYIPCKEAGLAFQRGDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQ 305
            . ||:..:..:.|||.  ||....|....|||:.|:::|:. |.|.||                 
 Worm   213 H-RVQDTYSSHIDVDR--PCLWLDLEVNPGDVIQILSKDEK-WMQVRK----------------- 256

  Fly   306 ERRILHDRTQKNGTDLDSKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDR 370
                |.|.||..                      .||.|                          
 Worm   257 ----LGDLTQVG----------------------YLPTS-------------------------- 269

  Fly   371 EQIATYEEVAKLYPRPGVF--RPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEV 433
               .|.|:|:.|.|    |  |.:||:||.|.||.:::..|:...|..|.:.||.|:|..|.|||
 Worm   270 ---LTMEKVSMLCP----FGRRTLVLLGAVGTGRRDIKSMLLRLAPHYFSTIVPLTSRAQRPGEV 327

  Fly   434 AGREYIFVAREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTA 498
            .||||.||.:|::...|..|..||.||....||||||:||::.:.:|.:|||....|::..|..|
 Worm   328 EGREYQFVRKEEIYQKIREGGMVEWGELDSQLYGTSADSVRNEIRSGRMCVLDAAPQSVNYLYNA 392

  Fly   499 QLKPFLIHVKPPELDILKATRTEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVEL 563
            :..||::||.||.::  :.|:.||..::...:...:|..||..:..::...:|        .:.|
 Worm   393 EFMPFVVHVVPPPIE--EFTQLEAVRRTHRTQGQLQSICDESAKIGLECKSKI--------HLTL 447

  Fly   564 VNGELVNAFEQLVQNVQRLENEPVWAPSMWV 594
            ||..:...|::||.:::.|..|..|.|..|:
 Worm   448 VNRNIDVTFKRLVDSLETLRYETQWVPHSWM 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 16/50 (32%)
L27 75..127 CDD:197794 7/61 (11%)
PDZ_signaling 139..229 CDD:238492 21/114 (18%)
SH3_MPP 243..302 CDD:212796 17/58 (29%)
Guanylate_kin 390..575 CDD:279019 64/184 (35%)
GuKc 399..580 CDD:214504 61/180 (34%)
magu-3NP_491260.2 PDZ 147..204 CDD:381812 14/66 (21%)
SH3 218..268 CDD:388381 20/95 (21%)
Guanylate_kin 282..464 CDD:366206 66/191 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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