DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and metro

DIOPT Version :10

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_061514847.1 Gene:metro / 1279654 VectorBaseID:AGAMI1_001949 Length:590 Species:Anopheles gambiae


Alignment Length:598 Identity:447/598 - (74%)
Similarity:518/598 - (86%) Gaps:11/598 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLEAVMASDINWDPALSKLISTLKESENLSNDQEIDFLKALLESKELNALVNVHTKVAKVGRDDR 65
            |...|||||.::||.:||||::|||:|:||:::::.||:.||:|||||||||||:||||:.:|||
Mosquito     1 MTAVVMASDGSYDPVISKLITSLKEAESLSDEKDLGFLQNLLQSKELNALVNVHSKVAKINKDDR 65

  Fly    66 LAPVLSTSAQVLYEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPV 130
            :||:||.|.|:|.||||.|:..||::..|||.|||||..|||.:|||||||||||||||||:.||
Mosquito    66 IAPLLSASVQILMEVLELLAPRCHISPLCKEVFHLLQTPHLQSILFAHDAIAQKDFYPHLPDIPV 130

  Fly   131 EMDEDEETIKIVQLVKSNEPL-TGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVG 194
            |:||||||||||||||||||| .||||.|||||||||||||:|||||||||||||||||||||||
Mosquito   131 EVDEDEETIKIVQLVKSNEPLCAGAQSAEPIVGATIKTDEETGKIIIARIMHGGAADRSGLIHVG 195

  Fly   195 DEVIEVNNINVEGKTPGDVLTILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDYNPDVDPYIP 259
            ||||||||||||||||.|||:|||||||||||||||:|.|..||||||||:|:|||.|:.|||||
Mosquito   196 DEVIEVNNINVEGKTPSDVLSILQNSEGTITFKLVPSDGKLDQRESKVRVKAYFDYEPENDPYIP 260

  Fly   260 CKEAGLAFQRGDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERRILHDRTQK--NGTDLD 322
            ||||||.|||||:||||:|||:||||||||.|::.|||||||||||||||||:||||  ||   |
Mosquito   261 CKEAGLGFQRGDILHIVSQDDSYWWQARKEGEKTTRAGLIPSRALQERRILHERTQKEPNG---D 322

  Fly   323 SKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVAKLYPRPG 387
            :|.|||||:|:||||||     :....|..|||||||||..||||||||.|||||||||||||||
Mosquito   323 AKKGSCASICSTPPGSP-----NPNHPCGGPKTKKIMYDTAENDDFDREMIATYEEVAKLYPRPG 382

  Fly   388 VFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADIEA 452
            ||||||||||||||||||:|||:||||||::|||||||||||.||||||||:||.||||:|||.|
Mosquito   383 VFRPIVLIGAPGVGRNELKRRLVARDPEKYKSPVPYTTRPMRPGEVAGREYLFVTREKMEADIAA 447

  Fly   453 GKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPELDILKA 517
            .||:||||||||||||:|:||||||||.|||||.|||||:|:||||||||:::|::||..:.||.
Mosquito   448 SKFIEHGEYKGHLYGTAADSVKSIVNASCVCVLGPHYQALKSLRTAQLKPYIVHIRPPAFEELKK 512

  Fly   518 TRTEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQRL 582
            :||:|||:|||||.|:|.||||||.:||||.|||:|.||||.|.|:||.:|..|||:||....:.
Mosquito   513 SRTKARARSTFDENNSRGFTDEEFMEMIKSDERINFHYGHFCDEEIVNDDLSEAFEKLVNFANKC 577

  Fly   583 ENEPVWAPSMWVQ 595
            |.||:|||:.|||
Mosquito   578 ETEPLWAPASWVQ 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 32/50 (64%)
L27 75..127 CDD:197794 36/51 (71%)
PDZ_MPP3-MPP4-MPP7-like 140..230 CDD:467260 84/90 (93%)
SH3_MPP 243..302 CDD:212796 45/58 (78%)
Guanylate_kin 390..575 CDD:395500 139/184 (76%)
metroXP_061514847.1 None

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