DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and sdt

DIOPT Version :10

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_061507016.1 Gene:sdt / 1273257 VectorBaseID:AGAMI1_003603 Length:1501 Species:Anopheles gambiae


Alignment Length:664 Identity:226/664 - (34%)
Similarity:337/664 - (50%) Gaps:147/664 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KELNALVNVHTKVAKVGRDDR-----LAPVLSTSAQVLYEVLEQL-----SQHC----HLNDDCK 95
            :.|...:|.|...|..||...     |.|.::.:..|...|||:.     :..|    .|..||.
Mosquito   869 QRLQGHLNKHGLAALAGRVTAAQSLLLGPGIARALAVRTAVLERRRPKIPNPICPNAQALAKDCV 933

  Fly    96 EAF------------HLLQDSHLQHLLFAHDAIAQ-KDFYP------------------------ 123
            |:.            .||....::.||.|||.||. .|..|                        
Mosquito   934 ESLAQSRSQTAIELCDLLSTYEMEGLLLAHDRIASTTDRSPIASYGGSPITVPVPLGTASNNTTS 998

  Fly   124 -----------------------HLPEAP------------------------VEMDEDEETIKI 141
                                   .:|..|                        |..|..::.|||
Mosquito   999 NNTTTSNNSINNNTLTSAVKPATVMPSIPNNASLVNNNNNNIAKREPMSVPLGVLRDGSQDHIKI 1063

  Fly   142 VQLVKSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVE 206
            :|:.||:|||          ||||:.:.|:  ::|.|::.||||::|||:|.|||::|||.|.:.
Mosquito  1064 IQIEKSSEPL----------GATIRNEGEA--VVIGRVVRGGAAEKSGLLHEGDEILEVNGIEMR 1116

  Fly   207 GKTPGDVLTILQNSEGTITFKLVPA------DNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAGL 265
            ||:..||..:|.:..||:||.:|||      ...|.:....:.|||||||:|:.|.||||:|.|:
Mosquito  1117 GKSVNDVCALLGSMTGTLTFLVVPAGVPQILPGLGMRDPPVLHVRAHFDYDPEDDLYIPCRELGI 1181

  Fly   266 AFQRGDVLHIVAQDDAYWWQARKE-HERSARAGLIPSRALQERR------ILHD---RTQKNGTD 320
            :||:|||||::::||..||||.:| .|....||||||::.|.:|      |..:   ||:|   |
Mosquito  1182 SFQKGDVLHVISRDDPNWWQAYREGEEDQTLAGLIPSQSFQHQRESMKLAIAGEVGLRTRK---D 1243

  Fly   321 LDSKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVAKLYPR 385
            ::.|.|..::|.....|..:...:||...  .|     :|.....||.|.|:|.||||||..|||
Mosquito  1244 INGKAGGGSTLLCARKGRKKKKKASSEHG--YP-----LYATATADDPDPEEILTYEEVALYYPR 1301

  Fly   386 PGVFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADI 450
            ....|||||||.|.:||:|||:||:| |.|:|.:.:|:|:|..|.|||.|::|.|::|::.::||
Mosquito  1302 ASHKRPIVLIGPPNIGRHELRQRLMA-DSERFAAAIPHTSRAQREGEVPGQDYHFISRQQFESDI 1365

  Fly   451 EAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPELDIL 515
            .|.||||||||:...||||.|:::::|.:|.:|||:.|.|::|.||::.|||:.:.|.||.|:.|
Mosquito  1366 LARKFVEHGEYEKAYYGTSLEAIRAVVASGKICVLNLHPQSLKLLRSSDLKPYTVLVAPPSLEKL 1430

  Fly   516 KATRTEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQ 580
            :..|..          ....:.:||.:::|.:|..::..:||.||:.::|.:...|:.||:..:.
Mosquito  1431 RQKRIR----------TGEPYKEEELKEIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEIN 1485

  Fly   581 RLENEPVWAPSMWV 594
            .||.||.|.||.|:
Mosquito  1486 SLEREPQWVPSSWL 1499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 7/27 (26%)
L27 75..127 CDD:197794 20/120 (17%)
PDZ_MPP3-MPP4-MPP7-like 140..230 CDD:467260 39/89 (44%)
SH3_MPP 243..302 CDD:212796 35/59 (59%)
Guanylate_kin 390..575 CDD:395500 75/184 (41%)
sdtXP_061507016.1 None

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