DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and PATJ

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_011538764.1 Gene:PATJ / 10207 HGNCID:28881 Length:1937 Species:Homo sapiens


Alignment Length:687 Identity:141/687 - (20%)
Similarity:222/687 - (32%) Gaps:243/687 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 WDPAL-----SKLISTLKESENLSN-DQE------IDFLKALLESKELNALVNVHTKVAKVG--- 61
            |.|.|     :.:|..:.:...:.. |.|      :.|....|.|:.|.. |::..|..:.|   
Human   110 WTPKLGNEDFNSVIQQMAQGRQIEYIDIERPSTGGLGFSVVALRSQNLGK-VDIFVKDVQPGSVA 173

  Fly    62 -RDDRLAPVLSTSAQVL---YEVLEQLSQHCHLNDDCKEAFHLLQD-SHLQHLLFAHDAIAQKDF 121
             ||.|    |..:.|:|   :..|:|...|       ::|..|||. :....|:.|.:.:..|..
Human   174 DRDQR----LKENDQILAINHTPLDQNISH-------QQAIALLQQTTGSLRLIVAREPVHTKSS 227

  Fly   122 YPH------LPEAPVEMDEDEETIKIVQLVKSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIM 180
            ...      |||. |.....||    |:|:.....|          |..|...:.|| :::..|:
Human   228 TSSSLNDTTLPET-VCWGHVEE----VELINDGSGL----------GFGIVGGKTSG-VVVRTIV 276

  Fly   181 HGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLTILQNSEGTITFKLVPAD------------- 232
            .||.|||.|.:..||.::::...||:|.|...|..:|:|...::.. ||..|             
Human   277 PGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRM-LVARDPAGDISVTPPAPA 340

  Fly   233 ----------NKGAQRESKVRVRAHFD-YNPD------------VDPYIPCKEAG---------- 264
                      :||...:|.:     |: ||.:            :..|:.....|          
Human   341 ALPVALPTVASKGPGSDSSL-----FETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSI 400

  Fly   265 ----LAFQRGDVLHIVAQD-----DAYWWQARKEH---ERSARAGLIPSRALQERRILHDRTQKN 317
                .|:..|   ||...|     |....|....|   |....||.:....|..|     :|..:
Human   401 IPGSAAYHNG---HIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRR-----KTSSS 457

  Fly   318 GTDLDSKPGSCASLCTTPPGSPRL----PASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEE 378
            .:.|:  |.|.......|...|.|    ...:.|:...:.:..|...|..:||:     |...|:
Human   458 TSPLE--PPSDRGTVVEPLKPPALFLTGAVETETNVDGEDEEIKERIDTLKNDN-----IQALEK 515

  Fly   379 VAKLYPRPGVFRPIVLIGAPGVGRNELRRR------------------LIARDPE--KFRSPVPY 423
            :.|:               |....|||:.|                  .||.|.|  |:...:|.
Human   516 LEKV---------------PDSPENELKSRWENLLGPDYEVMVATLDTQIADDAELQKYSKLLPI 565

  Fly   424 TTRPMRTGEVAGREYIFVAREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCV---CVL 485
            .|  :|.|                        ||...:.||.|      :.|||:.|.|   .:|
Human   566 HT--LRLG------------------------VEVDSFDGHHY------ISSIVSGGPVDTLGLL 598

  Fly   486 SPHYQAI---------KTLRTAQLKPFLIHVKPP------------ELDILKATRTEARAKSTFD 529
            .|..:.:         |:.|.|  ..||..|.||            |..:.:..|||.....|..
Human   599 QPEDELLEVNGMQLYGKSRREA--VSFLKEVPPPFTLVCCRRLFDDEASVDEPRRTETSLPETEV 661

  Fly   530 EANARSFTDEEFE-------------DMIKSAERIDF 553
            :.|....|:|:.:             :::|..:.:.|
Human   662 DHNMDVNTEEDDDGELALWSPEVKIVELVKDCKGLGF 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 13/61 (21%)
L27 75..127 CDD:197794 13/61 (21%)
PDZ_signaling 139..229 CDD:238492 23/89 (26%)
SH3_MPP 243..302 CDD:212796 16/93 (17%)
Guanylate_kin 390..575 CDD:279019 44/221 (20%)
GuKc 399..580 CDD:214504 43/212 (20%)
PATJXP_011538764.1 L27_2 8..65 CDD:117611
PDZ_signaling 135..218 CDD:238492 23/94 (24%)
PDZ_signaling 246..325 CDD:238492 26/94 (28%)
PDZ_signaling 366..450 CDD:238492 13/86 (15%)
PDZ_signaling 570..634 CDD:238492 21/95 (22%)
PDZ 683..772 CDD:214570 2/16 (13%)
PDZ_signaling 1066..1157 CDD:238492
PDZ 1236..1321 CDD:214570
PDZ 1459..1574 CDD:214570
PDZ_signaling 1586..1666 CDD:238492
PDZ_signaling 1729..1814 CDD:238492
PDZ_signaling 1852..1936 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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