DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and mpp4a

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_009302812.1 Gene:mpp4a / 100535324 ZFINID:ZDB-GENE-070912-523 Length:627 Species:Danio rerio


Alignment Length:649 Identity:225/649 - (34%)
Similarity:331/649 - (51%) Gaps:97/649 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AVMASDINWDPALSKLISTLKESENLSNDQEI---DFLKALLESKELNALVNVHTKVAKVGRDDR 65
            |..|.|.| |..|:::::.:.|....|.|::|   |.|.:||.:..|.:|:.|:..:.:..: |.
Zfish    11 AQSAYDDN-DAGLAQVLAEVLEEVRQSIDRDINGADLLHSLLSAPWLYSLLRVYECLVQHSQ-DA 73

  Fly    66 LAPVLSTSAQVLYEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPV 130
            ..|.|..|.::..|:...:......:.|.:|.:.||:..|:|.||.|||::||:|:.|.||..|.
Zfish    74 PNPYLPYSTRLSQEITASVRGLPAPSSDAQELYILLKSPHMQALLSAHDSVAQRDYGPVLPPLPD 138

  Fly   131 EMDEDEETIKIVQLVKSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGD 195
            .:.::||.::||.|||:.:||          ||||:.||::|.|.|||::|||.||||||::.||
Zfish   139 NLSDNEEAVRIVCLVKNKQPL----------GATIRKDEKTGNIFIARVIHGGLADRSGLLNSGD 193

  Fly   196 EVIEVNNINVEGKTPGDVLTILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDYNPDVDPYIPC 260
            :::|||...|.|..|..|:.||..|:|.|.||::|...:....::.:.|||..||:|..||.|||
Zfish   194 KLVEVNGQKVRGMQPEHVINILVRSQGNILFKVIPNSTQPTNSQATLYVRAMVDYSPLQDPAIPC 258

  Fly   261 KEAGLAFQRGDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERRILHDRTQKNGTDLDSKP 325
            .:.|:||.:||:|.||.|.|..||||||.|..|...|||||    ..:..|.:.:.    ..|:|
Zfish   259 PDVGMAFSKGDLLEIVDQRDIRWWQARKLHSASLCCGLIPS----TNQFRHKQREL----WWSQP 315

  Fly   326 GSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFD--------------------R 370
            .. |..|..|        .|:.....:..|.||....|:.:||:                    |
Zfish   316 YQ-AHTCIRP--------LSADDVGEEEITDKIKCTETDEEDFEFVSEEGENGEHMQGLYIAGFR 371

  Fly   371 EQIAT----------------------------YEEVAKLYPR-----PGVFRPIVLIGAPGVGR 402
            ..:..                            ||||.. |.|     |   |.|||||..|||.
Zfish   372 HSLRVWRRKSYSKRKPSCYSCSISSCHNTSANLYEEVVH-YQRHIDDPP---RLIVLIGPSGVGV 432

  Fly   403 NELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADIEAGKFVEHGEYKGHLYG 467
            ||||||||..:|..::.||.|||||...||..||||.||.:|.....:...||.|:.|:.||:||
Zfish   433 NELRRRLIKINPNTYQGPVSYTTRPQNMGEKNGREYHFVTKEVFAYMVVNHKFYEYEEHNGHMYG 497

  Fly   468 TSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPELDILKATRTEARAKSTFDEAN 532
            ||.:|||.:::.|.:||:......|:::|...|||::|:|:||..:.::.||     |.....||
Zfish   498 TSLDSVKDVLDNGKICVIDIEPHCIQSVRNKMLKPYIIYVRPPSPEGMRQTR-----KDPHFLAN 557

  Fly   533 ---ARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQRLENEPVWAPSMW 593
               .|.|.|::|||:...:..::..|..|||..:||.:|.::...|...:|..:.||.|.|:.|
Zfish   558 RYIKRYFHDKDFEDIEDVSRAMEAKYRQFFDCVIVNEDLQDSCMDLFTAIQHAQEEPQWIPASW 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 12/53 (23%)
L27 75..127 CDD:197794 17/51 (33%)
PDZ_signaling 139..229 CDD:238492 43/89 (48%)
SH3_MPP 243..302 CDD:212796 33/58 (57%)
Guanylate_kin 390..575 CDD:279019 77/187 (41%)
GuKc 399..580 CDD:214504 72/183 (39%)
mpp4aXP_009302812.1 L27 24..76 CDD:197794 12/52 (23%)
L27 84..133 CDD:308467 16/48 (33%)
PDZ 147..230 CDD:214570 44/92 (48%)
SH3 241..300 CDD:327375 34/62 (55%)
Guanylate_kin 419..610 CDD:331880 80/198 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594315
Domainoid 1 1.000 40 1.000 Domainoid score I12513
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23122
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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