DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and mpp4b

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_009300454.1 Gene:mpp4b / 100331226 ZFINID:ZDB-GENE-091021-2 Length:632 Species:Danio rerio


Alignment Length:665 Identity:227/665 - (34%)
Similarity:347/665 - (52%) Gaps:113/665 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MASDINWDPA--------------LSKLISTLKESENLS-NDQEIDFLKALLESKELNALVNVHT 55
            |..|:..||.              |:.:|:.::.|.|.. |..|:  |..||.:..|.:|:.|:.
Zfish     1 MKPDMETDPGSAPLEVGDKGLTQILAHVIAEVRGSINKDINGAEL--LYGLLNAPWLQSLLKVYE 63

  Fly    56 KVAKVGRDDRLAPVLSTSAQVLYEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKD 120
            .:.:..|.. ..|.:|.|:.:..::|..|....:.:::.:|.:.||...|||.||.|||.::.:|
Zfish    64 CLQRHLRGP-ARPYVSYSSGLSLQILSDLLAVPNPSNEARELYDLLGQPHLQALLSAHDTVSLRD 127

  Fly   121 FYPHLPEAPVEMDEDEETIKIVQLVKSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAA 185
            :.|.||..|.::.||||.::||.|||:|:||          ||||:.|:.:|:|.|||::|||.|
Zfish   128 YEPDLPPLPNDLPEDEEAMRIVCLVKNNQPL----------GATIRRDDVTGEIYIARVIHGGLA 182

  Fly   186 DRSGLIHVGDEVIEVNNINVEGKTPGDVLTILQNSEGTITFKLVPADNKGAQRESKVRVRAHFDY 250
            |||||:|.||.::|||...|.|..|..::.||.:|.|||.||:||..::....::.:.|||..||
Zfish   183 DRSGLLHAGDRLVEVNGQPVFGLEPEQIIQILAHSHGTIMFKVVPITDRPVNNQTMLYVRAMVDY 247

  Fly   251 NPDVDPYIPCKEAGLAFQRGDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERR------- 308
            :|..||.|||.:||:||::||:|.||.|.|:.||||.|....||.||||||.:|.:|:       
Zfish   248 SPQADPSIPCADAGMAFRKGDILEIVDQSDSLWWQAVKLPSTSACAGLIPSTSLLKRKQKEFWWS 312

  Fly   309 -ILHDRT-QKNGTDLDSKPGSCA-----------------------------------------S 330
             ..|..| .|:.:.:|.:....|                                         .
Zfish   313 QPYHPHTCVKSLSTVDEEDDMIAIDEKCVEADEEAFESEELKDEESEFSTNIEGIYLTGFRRSLR 377

  Fly   331 LCTTPPG---------SPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVAKLYPRP 386
            ||....|         |.|.|| |..||...|                      ||:|.:....|
Zfish   378 LCRRRRGQAFGTSQFCSLRCPA-SCYSSLSNP----------------------YEDVVRYQHHP 419

  Fly   387 -GVFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREKMDADI 450
             ...|.|.|||..|||.|||||:||..:|:.::.|||:||||.:..|.|||||.||:||:.|:.:
Zfish   420 EHTHRLIALIGPSGVGVNELRRKLIEINPKVYQGPVPHTTRPPKCHEEAGREYHFVSREQFDSMV 484

  Fly   451 EAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPPELDIL 515
            ...:|:|.||.:|||||.|.::||.::.:|.:||:.....|::::||.:|:.::|.:|||.::.:
Zfish   485 CNHRFIEFGELRGHLYGISVDAVKDVLTSGKICVIDIEPYALESVRTPELRAYVIFIKPPTVEQM 549

  Fly   516 KATRTEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQLVQNVQ 580
            |.||..:...:.:  ..:|.|.||:|.::..:..:::..|..|||..:||..|..|..||:..|:
Zfish   550 KRTRMNSNIITNY--YTSRPFRDEDFLEIEDAGRKMEQHYCQFFDHVIVNDGLQAACVQLLTAVR 612

  Fly   581 RLENEPVWAPSMWVQ 595
            |.::||.|.|:.|::
Zfish   613 RAQDEPQWVPTSWIR 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 12/51 (24%)
L27 75..127 CDD:197794 16/51 (31%)
PDZ_signaling 139..229 CDD:238492 44/89 (49%)
SH3_MPP 243..302 CDD:212796 34/58 (59%)
Guanylate_kin 390..575 CDD:279019 73/184 (40%)
GuKc 399..580 CDD:214504 70/180 (39%)
mpp4bXP_009300454.1 L27 23..75 CDD:295425 13/54 (24%)
L27 81..130 CDD:280918 14/48 (29%)
PDZ_signaling 147..226 CDD:238492 44/88 (50%)
SH3_MPP4 240..300 CDD:212967 35/59 (59%)
Guanylate_kin 424..612 CDD:279019 75/189 (40%)
GuKc 432..615 CDD:214504 72/184 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594314
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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