DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and mpp7

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_031759046.1 Gene:mpp7 / 100127657 XenbaseID:XB-GENE-950404 Length:601 Species:Xenopus tropicalis


Alignment Length:605 Identity:241/605 - (39%)
Similarity:374/605 - (61%) Gaps:39/605 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DPALSKLISTL--KESENLSNDQEIDFLKALLESKELNALVNVHTKVAKVGRDDRLAPVLSTSAQ 75
            |..|.::::||  :...::.:.:::.||..:...|.|::||.:|.|:....:::.: ||:.::..
 Frog    11 DTGLYEILATLPAQLQPHVDSQEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKENPM-PVIHSATA 74

  Fly    76 VLYEVLEQLSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDAIAQKDFYPHLPEAPVEMDEDEETIK 140
            :..|:.|:| |...||.:.:|...||...:|:.||..||.:|||.:.|.||..|.::|:||:::|
 Frog    75 LAEELAEEL-QSKSLNSEIRELLKLLSKPNLKALLSVHDTVAQKSYDPVLPPMPDDIDDDEDSVK 138

  Fly   141 IVQLVKSNEPLTGAQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINV 205
            |::|||:.|||          |||||.||::|.|::||||.|||||||||||||||:.|||.|:|
 Frog   139 IIRLVKNREPL----------GATIKKDEKTGAIVVARIMRGGAADRSGLIHVGDELREVNGISV 193

  Fly   206 EGKTPGDVLTILQNSEGTITFKLVPA-DNKGAQRESKVRVRAHFDYNPDVDPYIPCKEAGLAFQR 269
            |.|.|.:::.||..|:|.||||::|: ..:....:.|:.|:|.|||.|:.|..||||||||:|::
 Frog   194 EDKKPEEIIHILAQSQGAITFKIIPSIKEEPPNNDGKMFVKALFDYYPNEDKAIPCKEAGLSFRK 258

  Fly   270 GDVLHIVAQDDAYWWQARKEHERSARAGLIPSRALQERR------ILHDRTQK-----------N 317
            ||:|.|::||||.||||:.|.:.:.|||||||:..||||      ::.::.||           .
 Frog   259 GDILQIMSQDDATWWQAKHEGDANPRAGLIPSKQFQERRFALRKPVVSNQPQKVPNRKSYEETVE 323

  Fly   318 GTDLDSKPGSCA-SLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVAK 381
            ..:::......| |..|...|..|    |...|.:..||.|.||:..::|.:|...:.||||||.
 Frog   324 YEEIEEDAEFAAHSTGTYLAGFRR----SFRLSRKDRKTNKFMYECKKSDQYDTADVPTYEEVAL 384

  Fly   382 LYPRPG-VFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFVAREK 445
            ...:|. .:|.::|:|..|||.|||:|:::..:.:.:...||:|||..|:.|..|.||||:::..
 Frog   385 YQRKPNEKYRLVILVGPVGVGVNELKRKVLIGNSQHYGVTVPHTTRGKRSQENDGVEYIFISKHL 449

  Fly   446 MDADIEAGKFVEHGEYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAIKTLRTAQLKPFLIHVKPP 510
            .:.||...||:|:||||.:.||||.:||:|::....:|:|.....::|.|||::.|||:|.:|||
 Frog   450 FETDIHNNKFIEYGEYKNNYYGTSLDSVRSVLAKNKICLLDVQPNSLKHLRTSEFKPFVIFIKPP 514

  Fly   511 ELDILKATRTEARAKSTFDEAN-ARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGELVNAFEQ 574
            .::.|:.||..|:..|..||.. |:.|:||:||:||:|||.::..|.||||..:||.:|..|:.:
 Frog   515 TIERLRETRRNAKVISGKDERGAAKPFSDEDFEEMIQSAEAMEAQYDHFFDTTIVNDDLSAAYNE 579

  Fly   575 LVQNVQRLENEPVWAPSMWV 594
            |...::|||.|..|.|..|:
 Frog   580 LRSTLERLEMEGFWVPVSWL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 10/52 (19%)
L27 75..127 CDD:197794 19/51 (37%)
PDZ_signaling 139..229 CDD:238492 52/89 (58%)
SH3_MPP 243..302 CDD:212796 35/58 (60%)
Guanylate_kin 390..575 CDD:279019 78/185 (42%)
GuKc 399..580 CDD:214504 76/181 (42%)
mpp7XP_031759046.1 L27 12..68 CDD:197794 11/56 (20%)
L27 <87..125 CDD:197794 15/37 (41%)
PDZ_signaling 137..217 CDD:238492 52/89 (58%)
SH3_MPP7 232..292 CDD:212966 36/59 (61%)
GuKc 403..585 CDD:214504 76/181 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7515
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1455
Inparanoid 1 1.050 435 1.000 Inparanoid score I1658
OMA 1 1.010 - - QHG49437
OrthoDB 1 1.010 - - D245552at33208
OrthoFinder 1 1.000 - - FOG0000824
OrthoInspector 1 1.000 - - oto103543
Panther 1 1.100 - - LDO PTHR23122
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5259
SonicParanoid 1 1.000 - - X2258
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.