DRSC/TRiP Functional Genomics Resources

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Protein Alignment metro and magi3

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_012811019.1 Gene:magi3 / 100036692 XenbaseID:XB-GENE-981179 Length:1595 Species:Xenopus tropicalis


Alignment Length:640 Identity:112/640 - (17%)
Similarity:197/640 - (30%) Gaps:237/640 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LESKELNALVNVHTKVAKVGRDDRLAPVLSTSAQVLYEVLEQLSQHCHLNDDCKEAFHLLQDSHL 106
            ::.|....::::.|..|:.|.     .:|:...|:.|...:|                  ::..|
 Frog   782 VKGKSHKQVLDLMTNAARNGH-----VLLTVR
RQIYYTDKQQ------------------EEEEL 823

  Fly   107 QHLLFAHDAIAQKDFYPHL--------PEAPVE------MDEDEETIKIVQLVKSNEPLTGAQST 157
            ||...||:.      .|.|        |:.|.|      ..:|.|....|.|...|:|..|....
 Frog   824 QHTPPAHNG------SPRLNRIEVSAIPKLPAEAYDVILQRKDNEGFGFVILTSKNKPPPGVIPH 882

  Fly   158 EPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLTILQNSEG 222
            :                 |.|::.|..|||...:.|||.:..||..::...:..:::.:::::..
 Frog   883 K-----------------IGRVIEGSPADRCRKLKVGDRISAVNGQSIVELSHDNIVQLIKDAGN 930

  Fly   223 TITFKLV--------PADNKGAQRESKVRVR---------------AHFDYNPDVDPYIPCKEAG 264
            |:|..::        |:.:..|::....:.|               :..|:..|..|.:|   ||
 Frog   931 TVTLTVIAEEEHRGPPSGSNSARQSPAPQHRPMGQTQPTYGTLDRYSWSDHKADCGPALP---AG 992

  Fly   265 LAFQRGDVLHIVAQDDAYWWQARK------EHERSARA-------------GLIPSRALQERRIL 310
            .                  |||:.      |.||..|.             ||...|..::...:
 Frog   993 S------------------WQAQSVGCYPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAI 1039

  Fly   311 HDRTQKNG---TDLDSKP---------------GSCASLCTTPPGSPRLPASSSTSSCRQPKTKK 357
            .|.....|   .:::::|               |....|....||:..:|..:...|.....|..
 Frog  1040 KDGRIHVGDQIVEINNEPTQGITHTRAIELIQAGGSKVLLLLRPGTGLIPDYNELDSAHPSSTSV 1104

  Fly   358 IMYDLTENDDFDREQIATYEEVAKLYPRPGVF--------------RPIV----------LIGAP 398
            :..|||           |:...:...|.|||.              :.||          :...|
 Frog  1105 VFEDLT-----------TFSSTSFTTPVPGVSCLKNYDEGFVEVPEKDIVPKDNIQKSRNVTSLP 1158

  Fly   399 GVGRNELRRRLIARDPEKFRSPVPYT----TRPMRTGEVAGREYIFVAREKMDADIEAGKFVEHG 459
            .....:       ::.|.|:...|.:    ....:...|:.|..|.:.:      :||.|  |:|
 Frog  1159 SFSTQD-------QEMESFQQDNPVSDFLNNSKTKDASVSPRNTISMNQ------LEAAK--ENG 1208

  Fly   460 EYKGHLYGTSAESVKSIVNAGCVCVLSPHYQAI--------KTLRTAQLKPFLIHVKPPELDILK 516
            :.:|.     :.|.|..:|...    |.|...:        |.:|.....|..:|.|..|....|
 Frog  1209 KRRGR-----SVSPKKSINKNS----SSHLDGLQEHREYVSKEIRDRSTSPRKVHTKTTEGVADK 1264

  Fly   517 AT--------------------RTEARAKSTFDEANA-----RSFTDEEFEDMIK 546
            .|                    :.|..||.:..|..:     ||.|..|.:|.::
 Frog  1265 VTLSNDQTRGYRGRSTSPKKPYKNEGVAKESTREQKSQSRSHRSSTKPENQDQVR 1319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794 4/25 (16%)
L27 75..127 CDD:197794 10/59 (17%)
PDZ_signaling 139..229 CDD:238492 18/89 (20%)
SH3_MPP 243..302 CDD:212796 16/92 (17%)
Guanylate_kin 390..575 CDD:279019 37/204 (18%)
GuKc 399..580 CDD:214504 34/185 (18%)
magi3XP_012811019.1 PDZ_signaling 31..97 CDD:238492
NK 119..>193 CDD:388413
WW 290..322 CDD:197736
WW 337..368 CDD:197736
PDZ 410..490 CDD:214570
PDZ 574..655 CDD:214570
PDZ_signaling 727..808 CDD:238492 5/30 (17%)
PDZ_signaling 852..937 CDD:238492 20/101 (20%)
PDZ_signaling 1004..1082 CDD:238492 12/77 (16%)
PTZ00121 <1202..1571 CDD:173412 28/129 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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