DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment metro and dlg4

DIOPT Version :9

Sequence 1:NP_610642.2 Gene:metro / 36176 FlyBaseID:FBgn0050021 Length:595 Species:Drosophila melanogaster
Sequence 2:XP_009300293.1 Gene:dlg4 / 100000823 -ID:- Length:805 Species:Danio rerio


Alignment Length:548 Identity:154/548 - (28%)
Similarity:234/548 - (42%) Gaps:145/548 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 HLLQDSHLQHLLF-AHDAIAQKDFYPH--LPEAPVEMDE-------DEETIKIVQLVKSNEPLTG 153
            ||  |:.|.|..| |.|       ||.  .|.:|.....       |::..:..:.|..:...||
Zfish   344 HL--DTDLGHPNFLASD-------YPQALTPTSPSRFSPVLHGLLGDDDLPRDPRRVVIHRGSTG 399

  Fly   154 AQSTEPIVGATIKTDEESGKIIIARIMHGGAADRSGLIHVGDEVIEVNNINVEGKTPGDVLTILQ 218
                   :|..|...|:...|.|:.|:.||.||.||.:..||:::.||.:::...|.......|:
Zfish   400 -------LGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRAATHEQAAAALK 457

  Fly   219 NSEGTITFKLVPADNKGAQRESKVR---------------------------VRAHFDYNPDVDP 256
            |:..|:|........:.::.|:|:.                           :||.|||:...|.
Zfish   458 NAGQTVTIIAQYRP
EEYSRFEAKIHDLREQLMNSSMGSGTTTLRSNPKRGFYIRALFDYDKTADC 522

  Fly   257 YIPCKEAGLAFQRGDVLHIVAQDDAYWWQARK------EHERSARAGLIPSRALQERRILHDRTQ 315
            ....:..|..|  |||||::...|..||||.:      |.|    .|.|||:...||        
Zfish   523 GFLSQAVGFRF--GDVLHVLDCGDEEWWQACRVSPQGDEEE----VGFIPSKRRVER-------- 573

  Fly   316 KNGTDLDSKPGSCASLCTTPPGSPRLPASSSTSSCRQPKTKKIMYDLTENDDFDREQIATYEEVA 380
            |..|.|.||....:             ..|..|..|:                  |.:.:||.||
Zfish   574 KEWTRLKSKERDRS-------------RDSIGSQGRE------------------EPVRSYETVA 607

  Fly   381 KL---YPRPGVFRPIVLIGAPGVGRNELRRRLIARDPEKFRSPVPYTTRPMRTGEVAGREYIFV- 441
            ::   |.     |||:::|..   ::.:...|::..|:||.|.||:||||.|..||.||:|.|| 
Zfish   608 QVEVHYA-----RPIIILGPV---KDRVNDDLLSEFPDKFGSCVPHTTRPKREYEVDGRDYHFVS 664

  Fly   442 AREKMDADIEAGKFVEHGEYKGHLYGTSAESVKSIV-NAGCVCVLSPHYQAIKTLRTAQLKPFLI 505
            :||:|:.||:..:|:|.|:|..||||||.:||:.:. ..|..|:|.....|::.|:.|||.|..|
Zfish   665 SREQMEKDIQNHRFIEAGQYNSHLYGTSVQSVREVAEQQGKHCILDVSANAVRRLQAAQLHPIAI 729

  Fly   506 HVKPPELD-ILKA-TR-TEARAKSTFDEANARSFTDEEFEDMIKSAERIDFLYGHFFDVELVNGE 567
            .|:|..|: :|:. || ||.:|:...|.|             ||..:  |||  ..|.. :|.|:
Zfish   730 FVRPKSLENVLEINTRLTEEQARKGMDRA-------------IKLEQ--DFL--ECFSA-IVEGD 776

  Fly   568 LVNAFEQLVQNVQRLENEP----VWAPS 591
               :||::...|:.:..|.    :|.|:
Zfish   777 ---SFEEVYHKVKTVIEEQSGPYIWIPT 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
metroNP_610642.2 L27 17..68 CDD:197794
L27 75..127 CDD:197794 10/30 (33%)
PDZ_signaling 139..229 CDD:238492 24/89 (27%)
SH3_MPP 243..302 CDD:212796 23/91 (25%)
Guanylate_kin 390..575 CDD:279019 71/189 (38%)
GuKc 399..580 CDD:214504 67/185 (36%)
dlg4XP_009300293.1 MAGUK_N_PEST 39..141 CDD:287565
PDZ_signaling 142..226 CDD:238492
PDZ 234..323 CDD:214570
PDZ_assoc 334..389 CDD:287558 13/53 (25%)
DegQ <372..465 CDD:223343 24/99 (24%)
PDZ 388..471 CDD:214570 24/89 (27%)
SH3 507..572 CDD:302595 24/70 (34%)
Guanylate_kin 613..792 CDD:279019 73/207 (35%)
GuKc 624..792 CDD:214504 68/188 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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