DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7737 and kdm1a

DIOPT Version :9

Sequence 1:NP_001286308.1 Gene:CG7737 / 36174 FlyBaseID:FBgn0033584 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001229924.1 Gene:kdm1a / 558450 ZFINID:ZDB-GENE-030131-7828 Length:833 Species:Danio rerio


Alignment Length:602 Identity:146/602 - (24%)
Similarity:230/602 - (38%) Gaps:159/602 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KIVVIGAGASGVACATKLLELGFQNVLVVEAEDRLGGRIHTIPFADNVIDLGAQWCHGERDN--- 106
            |::|||||.||:|.|.:|...| .:|.|:|:.||:|||:.|....:.|.||||....|...|   
Zfish   254 KVIVIGAGVSGLAAARQLQSFG-MDVTVLESRDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMA 317

  Fly   107 -----IVYELTR-KQDEELLESTGPVYENYECVRSNGDVVPEEVSSRLKAIVGDSLVTRQLELRH 165
                 :..||.: ||...|.|:.|...|....|....|.:.|:..:||  :...|.::.||:...
Zfish   318 VVSKQVNMELAKIKQKCPLYEANGQAGERCTSVPKEKDEMVEQEFNRL--LEATSYLSHQLDFNF 380

  Fly   166 CSG---SLGSY--------------------------------LTNKFYDTLRR--------PEN 187
            .:.   |||..                                |.||...|..:        .|.
Zfish   381 LNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVTTKEKVKELHQQYKEA 445

  Fly   188 SDI--DAEVASEFFVN---------YQKFENSVEASDTLEQVSGRGYLDYWECE--GDILLNWKD 239
            |::  ..::.:||.|.         .::::..||....||:     .|...|..  .|:.|:.:|
Zfish   446 SEVKPPRDITAEFLVKSKHRDLTALCKEYDELVEMQVKLEE-----RLQELEANPPSDVYLSSRD 505

  Fly   240 KGYVELLRLLMRSRELNVEHGVLEQRLLLGTRVVKINWNRNDG----RVELQMSNGETCI----- 295
                   |.::.....|:|   ......|.|..:| :|:::|.    ...|.:.||.:|:     
Zfish   506 -------RQILDWHFANLE---FANATPLSTLSLK-HWDQDDDFEFTGSHLTVRNGYSCVPVALA 559

  Fly   296 --------------------------------------ADHVVVTVSLGVLKDQHLRL-FEPQLP 321
                                                  .|.|:.|:.|||:|.|...: |.|.||
Zfish   560 EGLDIKLNTAVRQVRYTSSGCEVIAVNTRSTTQTFIYKCDAVLCTLPLGVMKQQPPAVQFVPPLP 624

  Fly   322 VEKQRAIDGLAFGTVNKIFVEFPEAFWPEDWTGFTMLWRDEDLDDIRGTSRAWLEDVFGFYRVSY 386
            ..|..||..:.||.:||:.:.|...||......|..:          |::.|...::|.|:.: |
Zfish   625 EWKTAAIQRMGFGNLNKVVLCFDRVFWDPSVNLFGHV----------GSTTASRGELFLFWNL-Y 678

  Fly   387 QPRILAGWITNESGRHMETLPVDEVQAGVMYLFRR-FLRWKIPDPANFRTSAWYTNDNFRGSYSY 450
            :..||...:..|:...||.:..|.:....:.:.:. |....:|.|.....|.|..:...||||||
Zfish   679 KAPILLALMAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSY 743

  Fly   451 RSMDTEQLGTGARELSHPLTVVATTPEKDKDSEDEAWQQSRCDRPIVQFAGEASSEHYYSTVHGA 515
            .:..:.  |.....::.|:|.....|...:..            |.:.||||.:..:|.:|||||
Zfish   744 VAAGSS--GNDYDLMAQPITPGPAIPGASQPV------------PRLFFAGEHTIRNYPATVHGA 794

  Fly   516 VEAGWREARRLA-QFYG 531
            :.:|.|||.|:| ||.|
Zfish   795 LLSGLREAGRIADQFLG 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7737NP_001286308.1 NAD_binding_8 48..106 CDD:290186 26/57 (46%)
Amino_oxidase 54..526 CDD:279874 135/585 (23%)
kdm1aNP_001229924.1 SWIRM 151..238 CDD:282311
NAD_binding_8 257..315 CDD:290186 26/58 (45%)
Amino_oxidase 262..805 CDD:279874 135/586 (23%)
SKA2 371..>441 CDD:302619 9/69 (13%)
Prefoldin 393..494 CDD:298833 15/105 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0685
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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