DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7737 and Su(var)3-3

DIOPT Version :9

Sequence 1:NP_001286308.1 Gene:CG7737 / 36174 FlyBaseID:FBgn0033584 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_649194.1 Gene:Su(var)3-3 / 40217 FlyBaseID:FBgn0260397 Length:890 Species:Drosophila melanogaster


Alignment Length:602 Identity:148/602 - (24%)
Similarity:241/602 - (40%) Gaps:155/602 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KIVVIGAGASGVACATKLLELGFQNVLVVEAEDRLGGRIHTIPFADNVIDLGAQWCHGERDNIVY 109
            |::|||||.||:|.|.:|.:.| .:|:|:||.||:||||.|......:.|:||....|...|.:.
  Fly   266 KVIVIGAGISGLAVAHQLQQFG-MDVIVLEARDRVGGRISTFRKNSYIADVGAMVVTGVYGNPMT 329

  Fly   110 ELTRKQDEEL--LESTGPVY--ENYECVRSNGDVVPEEVSSRLKAIVGDSLVTRQLELRH---CS 167
            .|:::...:|  ::.|.|:|  :.....:...||:..|.:..|::.   |.::.:|:..:   |.
  Fly   330 ILSKQIGMDLVPIQQTCPLYGPDGKPVPKEKDDVIEREFNRLLESA---SYLSHRLDFNYAGDCP 391

  Fly   168 GSLGSYL-----------------------------------TNKFYDTL-------------RR 184
            .|||..|                                   .....||:             |:
  Fly   392 VSLGDALEWIISMQEMQVMHKRGQHMQEIIATQTKIIEQRRRLKTLRDTIGKLKNEHLAMINQRK 456

  Fly   185 PENSDIDAEVA-SEFFV-NYQ-KFENSVEASDTLEQVSGRGYLDYWECE----GDILLNWKDK-- 240
            |:.:|.|.:.. .||.: |.| |.|.::.....|.....:......|.|    .|:.|:.:|:  
  Fly   457 PKGTDGDLKYCYQEFNIRNTQIKMEETISTFHDLHAEEKQMLAKLHELEQNRPSDVYLSSRDRLI 521

  Fly   241 -----------------------------------------GYVELLRLLMRSRELNVEHGVLEQ 264
                                                     ||..:...|..:.::.|...|.| 
  Fly   522 LDWHFANLEFANATRLNNLSLKHWDQDDDFEFIGHHTTVRNGYSCVPVALTENLDIRVNSAVKE- 585

  Fly   265 RLLLGTRVVKINWNRNDGRVELQMSNGE-TCIADHVVVTVSLGVLK---------DQHLRLFEPQ 319
             :..||:.|::      ....|:.||.: |..||.||.|::|||||         ..:...|:|.
  Fly   586 -IKYGTKGVEV------VAENLKTSNSQMTYKADLVVCTLTLGVLKVAVAHKESQQSNTVKFDPP 643

  Fly   320 LPVEKQRAIDGLAFGTVNKIFVEFPEAFWPEDWTGFTMLWRDEDLDDIRGTSRAWLEDVFGFYRV 384
            ||..||:||..|.||.:||:.:.|...||..:...|..:          |::.|...::|.|:.:
  Fly   644 LPDWKQQAIKRLGFGNLNKVVLCFDRIFWDPNANLFGHV----------GSTTASRGEMFLFWSI 698

  Fly   385 SYQPRILAGWITNESGRHMETLPVDEVQAGVMYLFRR-FLRWKIPDPANFRTSAWYTNDNFRGSY 448
            |..|.:|| .:...:...:|::..|.:....|.:.:. |....:|.|.....:.|.::...||||
  Fly   699 SSSPVLLA-LVAGMAANLVESVTDDIIIGRCMSVLKNIFGNTSVPQPKETVVTRWRSDPWARGSY 762

  Fly   449 SYRSMDTEQLGTGARELSHPLTVVATTPEKDKDSEDEAWQQSRCDRPIVQFAGEASSEHYYSTVH 513
            ||.|:       |:....:.|......|...||:|         ..|.:.||||.:..:|.:|||
  Fly   763 SYVSV-------GSSGSDYDLLAAPVIPPSSKDAE---------GLPRLFFAGEHTIRNYPATVH 811

  Fly   514 GAVEAGWREARRLAQFY 530
            ||..:|.|||.|:|.:|
  Fly   812 GAYLSGLREAGRIADYY 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7737NP_001286308.1 NAD_binding_8 48..106 CDD:290186 26/57 (46%)
Amino_oxidase 54..526 CDD:279874 139/587 (24%)
Su(var)3-3NP_649194.1 SWIRM 165..250 CDD:282311
NAD_binding_8 269..327 CDD:290186 26/58 (45%)
Amino_oxidase 274..824 CDD:279874 139/588 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452798
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46708
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10742
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.