DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7737 and lsd-1

DIOPT Version :10

Sequence 1:NP_001286308.1 Gene:CG7737 / 36174 FlyBaseID:FBgn0033584 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_510000.2 Gene:lsd-1 / 181369 WormBaseID:WBGene00011615 Length:737 Species:Caenorhabditis elegans


Alignment Length:615 Identity:149/615 - (24%)
Similarity:235/615 - (38%) Gaps:167/615 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ISKFPMHNIQ--LPGMSGAQRNQDRKIVVIGAGASGVACATKLLELGFQNVLVVEAEDRLGGRIH 84
            :|:|.|.||.  .|........:.:.:|||||||:|:|.||:||..|| :|.||||....|||:.
 Worm   151 LSRFGMINIGFFFPKTELVNNMEKKFVVVIGAGAAGIAAATQLLTFGF-DVAVVEASGLTGGRVR 214

  Fly    85 TIPFADNVIDLGAQWCHGERDNIVYELTRKQDEELLES---TGPVYENY----ECVRSNGDVVPE 142
            ::...           |||......:..|..||.::.:   ..|:.||.    ..|.|.|..|| 
 Worm   215 SLISK-----------HGELIETGCDSLRNLDESVITTLLHQVPLNENIMSENTIVFSKGKYVP- 267

  Fly   143 EVSSRLKAIVGDSLVTRQLELRHCS------GSLGSYLTNK------------------------ 177
              .:|...|.| .....:..|.|.|      |..|.|::.:                        
 Worm   268 --VARCHVING-LYANLKAGLAHASHGPEQRGENGLYISRQQAYENYFNMIERSTLLSYYNFAKE 329

  Fly   178 ----------FYDTLR---------------RPENSD-------IDAEVA-SEFFVNYQKFENSV 209
                      .|:.|:               .|.:.:       ||.|.| .:|....::||...
 Worm   330 KVNLNAERKHLYEVLKTNRLTALLAEQKLKNTPPSDELLLKSLQIDIEKAIRQFDEACERFEICE 394

  Fly   210 EASDTLEQ-------VSGRGYLDYWECEGDILLNWKDKGYVELL----------RLLMRSRELNV 257
            |....||:       :....::.|     :.||.::::.:...|          .|.::|:...|
 Worm   395 ERIADLEKNPRCKQSMHPNDFIHY-----NFLLGFEERLFGAQLEKVQFSCNVNELKLKSQVARV 454

  Fly   258 EHGVL--------EQRLLL--GTRVVKINWNRNDGRV-ELQMSNGETCI--ADHVVVTVSLGVLK 309
            :.|:.        |:::.:  ..||::|:...:|..: :|:..:|...|  ||:||.|:.:||||
 Worm   455 QEGLAQVLINVANERKVKIHHNQRVIEIDTGSSDAVILKLRKPDGSVGILNADYVVSTLPIGVLK 519

  Fly   310 -----DQHLRLFEPQLPVEKQRAIDGLAFGTVNKIFVEFPEAFWPEDWTGFTMLWRDEDLDDIRG 369
                 |:...:|.|.||..|..||..|..|.:|||...|...||||....|.::   .|....|.
 Worm   520 KTIIGDERAPVFRPPLPKSKFAAIRSLGNGLINKIVFVFETRFWPESINQFAIV---PDKISERA 581

  Fly   370 TSRAWLEDVFGFYRVSYQP--RILAGWITNESGRHMETLPVDEVQAGVMYLFRRFLRWKIPDPAN 432
            ....|          |..|  |.|......|:..|  ..||.|:....:.:.:...: ..|.|.:
 Worm   582 AMFTW----------SSLPESRTLTTHYVGENRFH--DTPVTELITKALEMLKTVFK-DCPSPID 633

  Fly   433 FRTSAWYTNDNFRGSYSYRSMDTEQLGTGARELSHPLTVVATTPEKDKDSEDEAWQQSRCDRPIV 497
            ...:.|:|::...|:.::.|:.||.....|  |..||                   ::|..:|.|
 Worm   634 AYVTNWHTDELAFGTGTFMSLRTEPQHFDA--LKEPL-------------------KTRDGKPRV 677

  Fly   498 QFAGEASSEHYYSTVHGAVEAGWREARRLA 527
            .||||.:|...:.|:.||..:|.|.|..||
 Worm   678 FFAGEHTSALEHGTLDGAFNSGLRAAADLA 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7737NP_001286308.1 Amino_oxidase 54..526 CDD:396255 134/578 (23%)
lsd-1NP_510000.2 SWIRM 80..158 CDD:461307 3/6 (50%)
Amino_oxidase 191..706 CDD:396255 131/572 (23%)

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