DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9084 and scrm-6

DIOPT Version :9

Sequence 1:NP_001260884.1 Gene:CG9084 / 36172 FlyBaseID:FBgn0033582 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_492890.2 Gene:scrm-6 / 185826 WormBaseID:WBGene00009753 Length:292 Species:Caenorhabditis elegans


Alignment Length:294 Identity:66/294 - (22%)
Similarity:98/294 - (33%) Gaps:115/294 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 QPRP---EAPRIPLPVPIATVTGSRTLIPLSGYDCLADLPSVHIEQTFELNDVRLPFAALTGVSS 100
            |||.   |.|.:...:|| .:||...|.|.:..|.||...|:.|.|..|      |....||:.:
 Worm    46 QPRDTPMEVPNMIAAMPI-QMTGFVDLAPHTILDVLAQTTSLMIVQCLE------PLEIFTGIET 103

  Fly   101 ENRYVVRS----PL-----GDAIFAANESSTEKNRL-----LWGA-------GRPF--------- 135
            .|||||..    ||     ..:.||.....:::|..     ::||       .||.         
 Worm   104 PNRYVVHDMYCRPLLYCMERSSFFARQHQGSQRNFAMQCMDIFGAPVMNCFRSRPCCSCDDFLAT 168

  Fly   136 -----------------QMHLLDKTHQEALVFRKKLAMGSMCCQAKSL-EIWIPPGNLLGKVVQ- 181
                             ..||:.....|.|:.|   :.|..||....: .:....|..:|::|: 
 Worm   169 EFLGQRIGMMKRECCDDNFHLVGTGSNEPLLVR---SPGCACCGGTQVFPVMTYNGAKIGEIVRL 230

  Fly   182 SPTFMQPEFFIEDESTGQLTFCVEGPVGLGFCCFSLPKDCYFKIHSGGNMRASIDHKWLASKSQY 246
            .|.||| |::.:.:     |:.|..|.       .||.  ..||                     
 Worm   231 YPGFMQ-EWYTDAD-----TYIVHFPP-------DLPP--ILKI--------------------- 259

  Fly   247 TTNIYFSDAKLTAKERALILGSAFLLEYLFFQTR 280
                             |::.|.||::|.||:.|
 Worm   260 -----------------LLISSTFLIDYTFFENR 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9084NP_001260884.1 LOR 66..277 CDD:295149 52/259 (20%)
scrm-6NP_492890.2 LOR 65..275 CDD:295149 58/271 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0621
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.780

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