DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9084 and scrm-3

DIOPT Version :9

Sequence 1:NP_001260884.1 Gene:CG9084 / 36172 FlyBaseID:FBgn0033582 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_503934.2 Gene:scrm-3 / 182212 WormBaseID:WBGene00015437 Length:251 Species:Caenorhabditis elegans


Alignment Length:279 Identity:69/279 - (24%)
Similarity:117/279 - (41%) Gaps:50/279 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QQPSLSEPRVYDSHISITSQPRPEAPRIPLPVPIATVTGSRTLIPL----SGYDCLADLPSVHIE 80
            :||.:  |....|:::..||.....|...:|:|..|:. ...|.|:    .|.:.||.|.::.:.
 Worm     2 EQPLM--PPAPPSYVASQSQAITTQPGASIPMPPGTIV-IEALPPVEGIPGGLEYLAYLDTIMVH 63

  Fly    81 QTFELNDVRLPFAALTGVSSENRYVVRSPLGDAIFAANESSTEKNRLLWGAGRPFQMHLLDKTHQ 145
            |..|..::|      ||..::|:|.::            ....:.|...||.|.|.||::|..::
 Worm    64 QFLEPIEIR------TGWETKNKYAIK------------KICYQKRQCCGAERAFVMHIVDNFNK 110

  Fly   146 EALVFRKKLAMGSMCCQAKSLE---IWIPPGNLLGKVV--QSPTFMQPEFFIEDESTGQLTFCVE 205
            |.|..:::......||...|..   |..|...|||.|:  ...|........:||   :|.|.|:
 Worm   111 EVLTVKRERHCCGCCCWLGSTNKSTIESPSMGLLGTVLLGHGCTNSHCNVLDKDE---ELLFLVD 172

  Fly   206 GPVGLGFCC-----FSL-PKDCYFKIHSGGNMRASIDHKWLA-SKSQYTTNIYFS---DAKLTAK 260
            |.....:||     |:: ..|.|.:|       .:|..||.. .:..||....|:   .|.|..|
 Worm   173 GQGCCTYCCCDDKAFTIKTPDTYKRI-------GAITKKWGGIIREAYTDADTFAVTFPADLDVK 230

  Fly   261 ERALILGSAFLLEYLFFQT 279
            .:||:|.:.|::::..|::
 Worm   231 AKALLLATTFVIDFAEFES 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9084NP_001260884.1 LOR 66..277 CDD:295149 56/225 (25%)
scrm-3NP_503934.2 LOR 41..249 CDD:295149 59/235 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0621
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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