DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9084 and scrm-1

DIOPT Version :10

Sequence 1:NP_001260884.1 Gene:CG9084 / 36172 FlyBaseID:FBgn0033582 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_492976.2 Gene:scrm-1 / 173053 WormBaseID:WBGene00011935 Length:295 Species:Caenorhabditis elegans


Alignment Length:289 Identity:67/289 - (23%)
Similarity:122/289 - (42%) Gaps:52/289 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QYDSEIRVAQQPSLSEPRVYDSHISITSQPRPEAPRIPLPVPIATVTGSRTLIPLSGYDCLADLP 75
            |::...:..||...::|.|:       .||.|.:..:|:|..|..|.        :|.:.|..|.
 Worm    22 QFEMHQQQHQQAITTQPGVF-------VQPAPGSVWMPMPPAIQGVP--------TGLEYLTYLD 71

  Fly    76 SVHIEQTFELNDVRLPFAALTGVSSENRYVVRSPLGDAIFAANESSTEKNRLLWGAGRPFQMHLL 140
            ::.:.|..||.::      :|...::|:||:::..|:..:.|.|.|....|...|..|.|.||::
 Worm    72 TIMVHQIKELIEI------VTDWETKNKYVLKNANGEQCYYAFEESGCCERQCCGPQRGFVMHIV 130

  Fly   141 DKTHQEALVFRKKL------AMGSM----CCQAKSLEIWIPPGNLLGKVVQSPTFMQPEFFIEDE 195
            |...:|.|..:::.      ..|.:    |||.:.: |..|...:||.:.|....|...:.|.| 
 Worm   131 DNFKREVLTIKREFKCCGGGCCGCLACIGCCQQECI-IETPSMGVLGIIRQRCGCMSSNYDIMD- 193

  Fly   196 STGQLTFCVEGPVGLGFCCFSL----PKDCYFKIHSGGNMRASIDHKW-------LASKSQYTTN 249
            ..|.:.|.::||     ||..|    .|:...|..:.|.:..:|..||       ......:..|
 Worm   194 GDGNVIFQIDGP-----CCCMLCGCQDKEFPIKTANNGTVVGAITKKWGGCFREAFTDADTFAVN 253

  Fly   250 IYFSDAKLTAKERALILGSAFLLEYLFFQ 278
            .   ...|..|.:.:::|:.||::::.|:
 Worm   254 F---PGDLDVKLKGVLIGATFLIDFMEFE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9084NP_001260884.1 LOR 66..277 CDD:470445 54/231 (23%)
scrm-1NP_492976.2 Scramblase 51..280 CDD:252175 59/253 (23%)

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