DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9084 and scrm-1

DIOPT Version :9

Sequence 1:NP_001260884.1 Gene:CG9084 / 36172 FlyBaseID:FBgn0033582 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_492976.2 Gene:scrm-1 / 173053 WormBaseID:WBGene00011935 Length:295 Species:Caenorhabditis elegans


Alignment Length:289 Identity:67/289 - (23%)
Similarity:122/289 - (42%) Gaps:52/289 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QYDSEIRVAQQPSLSEPRVYDSHISITSQPRPEAPRIPLPVPIATVTGSRTLIPLSGYDCLADLP 75
            |::...:..||...::|.|:       .||.|.:..:|:|..|..|.        :|.:.|..|.
 Worm    22 QFEMHQQQHQQAITTQPGVF-------VQPAPGSVWMPMPPAIQGVP--------TGLEYLTYLD 71

  Fly    76 SVHIEQTFELNDVRLPFAALTGVSSENRYVVRSPLGDAIFAANESSTEKNRLLWGAGRPFQMHLL 140
            ::.:.|..||.::      :|...::|:||:::..|:..:.|.|.|....|...|..|.|.||::
 Worm    72 TIMVHQIKELIEI------VTDWETKNKYVLKNANGEQCYYAFEESGCCERQCCGPQRGFVMHIV 130

  Fly   141 DKTHQEALVFRKKL------AMGSM----CCQAKSLEIWIPPGNLLGKVVQSPTFMQPEFFIEDE 195
            |...:|.|..:::.      ..|.:    |||.:.: |..|...:||.:.|....|...:.|.| 
 Worm   131 DNFKREVLTIKREFKCCGGGCCGCLACIGCCQQECI-IETPSMGVLGIIRQRCGCMSSNYDIMD- 193

  Fly   196 STGQLTFCVEGPVGLGFCCFSL----PKDCYFKIHSGGNMRASIDHKW-------LASKSQYTTN 249
            ..|.:.|.::||     ||..|    .|:...|..:.|.:..:|..||       ......:..|
 Worm   194 GDGNVIFQIDGP-----CCCMLCGCQDKEFPIKTANNGTVVGAITKKWGGCFREAFTDADTFAVN 253

  Fly   250 IYFSDAKLTAKERALILGSAFLLEYLFFQ 278
            .   ...|..|.:.:::|:.||::::.|:
 Worm   254 F---PGDLDVKLKGVLIGATFLIDFMEFE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9084NP_001260884.1 LOR 66..277 CDD:295149 54/231 (23%)
scrm-1NP_492976.2 Scramblase 51..280 CDD:252175 59/253 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1940
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1015148at2759
OrthoFinder 1 1.000 - - FOG0000205
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.870

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