DRSC/TRiP Functional Genomics Resources

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Protein Alignment shn and Zfp808

DIOPT Version :9

Sequence 1:NP_001260883.1 Gene:shn / 36171 FlyBaseID:FBgn0003396 Length:2587 Species:Drosophila melanogaster
Sequence 2:NP_001034328.2 Gene:Zfp808 / 630579 MGIID:3704127 Length:753 Species:Mus musculus


Alignment Length:663 Identity:130/663 - (19%)
Similarity:208/663 - (31%) Gaps:192/663 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1802 HEDYTYIR-GRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQ- 1864
            |...|:|| ..|...:.|:.|.....|.:.|:.|.||||..:|:.|..|:.:|..|.||..|:: 
Mouse   174 HHLQTHIRVHTGEKPFKCNLCDKSFSKHNHLQSHRRTHTGEKPYKCDQCDKAFSEKCNLQTHIRI 238

  Fly  1865 ------------SKTHFKKC---IELGINPGPMPPDSEFLDVDMDFDQQSSTSAGGRTSSMAGES 1914
                        .||..:||   ..:.|:.|..|....  ..|..|.|.|:.....||.:  ||.
Mouse   239 HTGEKPYKCDQCDKTFSEKCHLQKHIRIHTGEKPYKCN--QCDKAFSQYSTLQTHRRTHT--GEK 299

  Fly  1915 DSDDYSDNESES--SDTDESKSRQKEHEAARGLLSLSMTPPI-----PQSVSPYPQLQDTPLPAA 1972
               .|..|:.:.  |.....::.::.|...:         |.     .::.|.|..||       
Mouse   300 ---PYKCNQCDKAFSQYGNLQTHRRTHTGEK---------PFKCNQCDKAFSQYSTLQ------- 345

  Fly  1973 SPANSIGSSGSQPKRL---------VCSF-------TSPKPPFDYQKQEQYYSNPEESKPKRSVA 2021
              .:....:|.:|.:.         .||.       |..||....|..:.:..|......:|:..
Mouse   346 --THRRTHTGEKPYKCNQCDKAFSEKCSLQRHIRIHTGEKPYKCNQCNKAFSHNYHLHIHRRTHT 408

  Fly  2022 NEESAPMDLTKPRGSILLISPSPVSVPAHDLPKSQAQQMHDVIFGTSGNESGFMKTLISVSDKVR 2086
            .|:                   |......|    :|..:|..:.......:|......:..||  
Mouse   409 GEK-------------------PYKCNQCD----KAFSIHFPLQNHKRTHTGEKPYKCNQCDK-- 448

  Fly  2087 ISAEMEEQAKHEAEGEDVQLQTYIKEHALHQA-KIKQ--SQFSRSYLINT---LYTAASPVMSSS 2145
                        |..|...||.:|:.|...:. |..|  ..||:.:.:.|   ::|...|     
Mouse   449 ------------AFSEKCHLQNHIRIHTGEKPYKCNQCDKAFSQYFSLQTHRRIHTGEKP----- 496

  Fly  2146 STLFTANSRPVMSVNEVPSIEVHEVKTPEAIESPRSAPEQAPVILAQIAQEENEEPNI---AEPH 2207
               |..|... .:.::..:::.|.          |:...:.|....|..:..::...:   ...|
Mouse   497 ---FKCNQCD-KAFSQYSTLQTHR----------RTHTGEKPFKCNQCDKAFSKHSTLQSHRRTH 547

  Fly  2208 NANLPAAVQQPDVNEFTGVLGNPTAPPTSSVTATSVSTTTAAPVAPSSTANSTQPAQRTVIVGED 2272
            :...|....|.|                                 .:.:..:|..|.|....||.
Mouse   548 SGEKPFKCSQCD---------------------------------KAFSQYNTLQAHRRTHSGEK 579

  Fly  2273 GFK---SSTPTSKSGDLQ-HVSYGRGVPPAPIAGDARPTCTMCSKTFQRQHQLTLHMNIHYMERK 2333
            .||   .....|:..:|| |:....|..|.        .|..|.|.|.:.:.|..|..||..|:.
Mouse   580 PFKCDQCDKAFSEKCNLQKHIRIHTGEKPY--------KCNQCDKAFSQYNTLQTHRRIHTGEKP 636

  Fly  2334 FKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHL 2398
            |||..|..:|.....||.|.|                 |.:..:||:|..|...|..:.:|..|.
Mouse   637 FKCNQCDKAFSRHSTLQTHRR-----------------THTGEKPFKCNQCDKVFSQYSNLQTHR 684

  Fly  2399 RSKTHVQKLECLQ 2411
            |:.|..:..:|.|
Mouse   685 RTHTGEKPYKCDQ 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shnNP_001260883.1 C2H2 Zn finger 486..506 CDD:275368
zf-H2C2_2 499..523 CDD:290200
C2H2 Zn finger 514..536 CDD:275368
zf-C2H2 1816..1838 CDD:278523 6/21 (29%)
C2H2 Zn finger 1818..1838 CDD:275370 6/19 (32%)
zf-H2C2_2 1830..1855 CDD:290200 10/24 (42%)
zf-C2H2 1844..1868 CDD:278523 8/36 (22%)
C2H2 Zn finger 1846..1868 CDD:275370 8/34 (24%)
zf-C2H2 2307..2328 CDD:278523 6/20 (30%)
C2H2 Zn finger 2308..2328 CDD:275368 6/19 (32%)
zf-C2H2_jaz 2333..2359 CDD:288983 9/25 (36%)
C2H2 Zn finger 2336..2358 CDD:275368 7/21 (33%)
C2H2 Zn finger 2381..2403 CDD:275368 6/21 (29%)
Zfp808NP_001034328.2 KRAB 4..>45 CDD:214630
KRAB 4..40 CDD:279668
COG5048 <130..284 CDD:227381 31/111 (28%)
C2H2 Zn finger 135..155 CDD:275368
C2H2 Zn finger 163..183 CDD:275368 4/8 (50%)
zf-H2C2_2 175..199 CDD:290200 6/23 (26%)
C2H2 Zn finger 191..211 CDD:275368 6/19 (32%)
zf-H2C2_2 203..227 CDD:290200 9/23 (39%)
C2H2 Zn finger 219..239 CDD:275368 7/19 (37%)
zf-H2C2_2 231..255 CDD:290200 5/23 (22%)
C2H2 Zn finger 247..267 CDD:275368 4/19 (21%)
zf-H2C2_2 259..284 CDD:290200 5/26 (19%)
C2H2 Zn finger 275..295 CDD:275368 5/21 (24%)
zf-H2C2_2 288..312 CDD:290200 6/28 (21%)
C2H2 Zn finger 303..323 CDD:275368 2/19 (11%)
zf-H2C2_2 315..340 CDD:290200 2/33 (6%)
COG5048 327..728 CDD:227381 89/503 (18%)
C2H2 Zn finger 331..351 CDD:275368 4/28 (14%)
zf-H2C2_2 344..367 CDD:290200 4/31 (13%)
C2H2 Zn finger 359..379 CDD:275368 2/19 (11%)
zf-H2C2_2 371..396 CDD:290200 5/24 (21%)
C2H2 Zn finger 387..407 CDD:275368 3/19 (16%)
C2H2 Zn finger 415..435 CDD:275368 3/23 (13%)
zf-H2C2_2 428..451 CDD:290200 4/36 (11%)
C2H2 Zn finger 443..463 CDD:275368 7/33 (21%)
zf-H2C2_2 455..480 CDD:290200 7/24 (29%)
C2H2 Zn finger 471..491 CDD:275368 4/19 (21%)
zf-H2C2_2 483..508 CDD:290200 5/33 (15%)
C2H2 Zn finger 499..519 CDD:275368 3/30 (10%)
zf-H2C2_2 512..535 CDD:290200 4/32 (13%)
C2H2 Zn finger 527..547 CDD:275368 1/19 (5%)
zf-H2C2_2 540..564 CDD:290200 4/56 (7%)
C2H2 Zn finger 555..575 CDD:275368 5/52 (10%)
zf-H2C2_2 568..591 CDD:290200 6/22 (27%)
C2H2 Zn finger 583..603 CDD:275368 4/19 (21%)
zf-H2C2_2 595..620 CDD:290200 9/32 (28%)
C2H2 Zn finger 611..631 CDD:275368 6/19 (32%)
zf-H2C2_2 624..648 CDD:290200 10/23 (43%)
C2H2 Zn finger 639..659 CDD:275368 7/36 (19%)
zf-H2C2_2 652..676 CDD:290200 10/40 (25%)
C2H2 Zn finger 667..687 CDD:275368 6/19 (32%)
zf-H2C2_2 679..703 CDD:290200 6/19 (32%)
C2H2 Zn finger 695..715 CDD:275368 2/3 (67%)
zf-H2C2_2 707..730 CDD:290200
C2H2 Zn finger 723..743 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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