DRSC/TRiP Functional Genomics Resources

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Protein Alignment shn and HIVEP3

DIOPT Version :10

Sequence 1:NP_001260883.1 Gene:shn / 36171 FlyBaseID:FBgn0003396 Length:2587 Species:Drosophila melanogaster
Sequence 2:NP_078779.2 Gene:HIVEP3 / 59269 HGNCID:13561 Length:2406 Species:Homo sapiens


Alignment Length:36 Identity:10/36 - (27%)
Similarity:18/36 - (50%) Gaps:6/36 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ETRTNSLDLLESKL------SDVNQDIYETMLCSES 46
            ||:.....:|:||.      ..|.:.:||:..|::|
Human   334 ETKRRRKRVLKSKTFVDEEGCIVTEKVYESESCTDS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
shnNP_001260883.1 C2H2 Zn finger 486..506 CDD:275368
zf-H2C2_2 499..523 CDD:463886
C2H2 Zn finger 514..536 CDD:275368
PRK12323 <1185..>1269 CDD:481241
zf-C2H2 1816..1838 CDD:395048
C2H2 Zn finger 1818..1838 CDD:275370
zf-H2C2_2 1830..1855 CDD:463886
zf-C2H2 1844..1868 CDD:395048
C2H2 Zn finger 1846..1868 CDD:275370
zf-C2H2_8 <2305..2352 CDD:464935
C2H2 Zn finger 2308..2328 CDD:275368
zf-C2H2_jaz 2333..2359 CDD:432381
C2H2 Zn finger 2336..2358 CDD:275368
C2H2 Zn finger 2381..2403 CDD:275368
HIVEP3NP_078779.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..112
ZAS1 192..242
C2H2 Zn finger 194..214 CDD:275368
zf-H2C2_2 207..231 CDD:463886
No DNA binding activity or transactivation activity, but complete prevention of TRAF-dependent NF-Kappa-B activation, associates with TRAF2 and JUN. /evidence=ECO:0000250 211..1074 10/36 (28%)
C2H2 Zn finger 222..242 CDD:275368
Acidic 1 264..287
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..358 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..409
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..540
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..633
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 677..696
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 706..1115
Acidic 2 862..883
Nuclear localization signal. /evidence=ECO:0000255 903..909
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1268..1303
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1406..1459
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1472..1594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1692..1727
ZAS2 1754..1806
zf-C2H2 1754..1776 CDD:395048
C2H2 Zn finger 1756..1776 CDD:275370
zf-H2C2_2 1768..1793 CDD:463886
ZnF_U1 1779..1812 CDD:197732
C2H2 Zn finger 1784..1802 CDD:275370
Acidic 3 1817..1872
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1818..2033
PHA03247 <1877..2395 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2052..2113
6 X 4 AA tandem repeats of S-P-X-[RK] 2053..2148
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2125..2151
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2224..2406
Blue background indicates that the domain is not in the aligned region.

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