Sequence 1: | NP_001260883.1 | Gene: | shn / 36171 | FlyBaseID: | FBgn0003396 | Length: | 2587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009290777.1 | Gene: | LOC568037 / 568037 | -ID: | - | Length: | 1974 | Species: | Danio rerio |
Alignment Length: | 2331 | Identity: | 486/2331 - (20%) |
---|---|---|---|
Similarity: | 790/2331 - (33%) | Gaps: | 741/2331 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 362 QQQSHQQVQQQQQQQQTPPPSVAI---------HEFSANFVNSNHVNAIGHEESIISNSGYKAAG 417
Fly 418 RTRTPLANSNSNTNSTSN-SNSNHAANATLSPASFAQHQQLTQPTT-VSPGIPGGAAAPNPAC-- 478
Fly 479 ----EKSGRYVCQYCNLICAKPSVLEKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAAR 539
Fly 540 ARGLEVPADADDGLSDQDAELSNSSSELPSRAGSPYEEPINSPTPSPSTLSAAKSAYIQQPPLPT 604
Fly 605 YMQQLPLGSPAAGTLPPTTADNHHSATAQHRQSIDYKPYKPKFHNASLYSCSSKELQQQQQQLQI 669
Fly 670 QQQQQQHQLAQQKLSIQLPLVQQPSLAHPTLSPSTQMKMKHHINSHQIQLQLQQQQSLLAQQSLL 734
Fly 735 AAMPPGGVYYLG--QPSYYNQDTAAAIHQ----HALAIQQFQIHLAQQQQQQQQQHPPLVKATPP 793
Fly 794 MQQPPSLPPQQLVRANSQISSVATAPATPTPAANLSTFASSSGGKQVNV------AKVQEHISKL 852
Fly 853 ISQNEAIVENKEILLQKKYPKQLSRSRSFNNANSNNASQH-------------GSNASALHANNS 904
Fly 905 QNNTNAQMPERETKVNLAQAIFQKQQHQLQQQQQQQITQQQQQQLEQQNYYTYIQQQQECQQQQL 969
Fly 970 EPPNGVVKRNAYKPGVVMTTPVKQQ---QQLPPPPSPL------------------PMQTMQYRQ 1013
Fly 1014 DPATPVTKI------------EQPTTAVPVMPLNLSAKPKPTLVTVPVSSLSTSSLAPTPTTSTN 1066
Fly 1067 PTSSSKTAPPPAQVNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICASEFR---SADDLKLHNST 1128
Fly 1129 YCQDASSSAPMS---------------PASSPFRSNSISLSLPEL------KSHMANSKNPLSLA 1172
Fly 1173 KLAWSQLKTKRSSLVLSRLSAAQTPARTSTVTAPTVTASAPAPAVATVTAPSSAPAPQ------- 1230
Fly 1231 IEALRFVDAPLPSPGPLLGKTPLVDYAQQSTPRKAQDSVVITKMHEDRQFVIEAQPAKRIKTSDL 1295
Fly 1296 VVASSS-----QQPTSFNFSFNNQNSSNSVPELQSSKEERLRRFTSSGGSM------IPISE--- 1346
Fly 1347 ---CPDLDNSPKMIRTPLLSG---GSFQDVSV---------------------KVNNETGSSSKE 1384
Fly 1385 RKLMALVSGSGLLGVSSGPQ-------HFQFPPINSITA-------FNPL-TLPPMSGGDKTTPV 1434
Fly 1435 TPIPHVPGMPGPGSLTPQMP-------------LLPPP--------------------------- 1459
Fly 1460 -----PQQLQLPIPS----------------------------------------SRGRSPNRKQ 1479
Fly 1480 ----PSPLLLGGGS------------GELKALSPFGGVQNVPSEFSRQPPTPAQRQALQWNSKEA 1528
Fly 1529 PKKAPFNFLRMADNVKTTEPEVRHFNLENVISGKQQELP--LTPLHVDTPNGNAPEETSPVASAS 1591
Fly 1592 ASAKSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLK 1656
Fly 1657 CSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKLKQVMALYDSRQRMLGNGSST 1721
Fly 1722 AMAGSGKLSYNLVASQQIVSSPSTSSTSSAFYQGPLKTPPTVTIAALSEANVAAKANEEAQAKKL 1786
Fly 1787 ETSPSGQPL-----VGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTC 1846
Fly 1847 SHCNFSFKTKGNLTKHMQSKTHFKKCIELGIN-PGPMPPDS-----------------EFLDVD- 1892
Fly 1893 ----------MDFDQQSSTSAGGRTSSMAGESD-SDDYSDNESESSDTDESKSRQKEHEAARGLL 1946
Fly 1947 SL-------------------------------SMTPPIPQS-----VSPYPQLQDTPLPAASPA 1975
Fly 1976 NSIGSSGSQPKRLVC--------SFTSPKPPFDYQKQEQYYSNP-----EESKPKRSVANEESAP 2027
Fly 2028 MDLTKPRGSILLISPSPVSVPAHDLPKSQAQQMHDVIFGTSGNESGFMKTLISVSDKVRISAEME 2092
Fly 2093 EQAKHEAEGEDVQLQTYIKEHALHQAKIKQSQFSRSYLINTLYTAASPVMSSSSTLFTANSRPVM 2157
Fly 2158 SVNEVPSIEVHEVKTPEAIESPRSAPEQAPVILAQIAQEENEEPNIAEPHNANLPAAVQQPDVNE 2222
Fly 2223 FTGVLGNPTAPPTSSV-------------------------TATSVSTTTAAPVAPSST-ANSTQ 2261
Fly 2262 PAQRTVIVGEDGFKSSTPTSKSGDLQHVSYGRGVPPAPIAG--------DARPTCT 2309 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shn | NP_001260883.1 | C2H2 Zn finger | 486..506 | CDD:275368 | 14/19 (74%) |
zf-H2C2_2 | 499..523 | CDD:290200 | 16/23 (70%) | ||
C2H2 Zn finger | 514..536 | CDD:275368 | 14/21 (67%) | ||
zf-C2H2 | 1816..1838 | CDD:278523 | 20/21 (95%) | ||
C2H2 Zn finger | 1818..1838 | CDD:275370 | 18/19 (95%) | ||
zf-H2C2_2 | 1830..1855 | CDD:290200 | 18/24 (75%) | ||
zf-C2H2 | 1844..1868 | CDD:278523 | 17/23 (74%) | ||
C2H2 Zn finger | 1846..1868 | CDD:275370 | 17/21 (81%) | ||
zf-C2H2 | 2307..2328 | CDD:278523 | 1/3 (33%) | ||
C2H2 Zn finger | 2308..2328 | CDD:275368 | 1/2 (50%) | ||
zf-C2H2_jaz | 2333..2359 | CDD:288983 | |||
C2H2 Zn finger | 2336..2358 | CDD:275368 | |||
C2H2 Zn finger | 2381..2403 | CDD:275368 | |||
LOC568037 | XP_009290777.1 | C2H2 Zn finger | 133..153 | CDD:275368 | 14/19 (74%) |
zf-H2C2_2 | 146..170 | CDD:290200 | 16/23 (70%) | ||
C2H2 Zn finger | 161..181 | CDD:275368 | 13/19 (68%) | ||
zf-C2H2 | 1465..1487 | CDD:278523 | 20/21 (95%) | ||
C2H2 Zn finger | 1467..1487 | CDD:275370 | 18/19 (95%) | ||
zf-H2C2_2 | 1479..1504 | CDD:290200 | 18/24 (75%) | ||
C2H2 Zn finger | 1495..1513 | CDD:275370 | 14/17 (82%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 108 | 1.000 | Domainoid score | I6359 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm25148 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR45944 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3898 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.090 |