Sequence 1: | NP_001260883.1 | Gene: | shn / 36171 | FlyBaseID: | FBgn0003396 | Length: | 2587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006241775.1 | Gene: | Zfat / 362925 | RGDID: | 1310886 | Length: | 1235 | Species: | Rattus norvegicus |
Alignment Length: | 1287 | Identity: | 240/1287 - (18%) |
---|---|---|---|
Similarity: | 396/1287 - (30%) | Gaps: | 480/1287 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 1554 NLENVISGKQQELPLTPLHVDTPNGNAPEETSPVASASASAKSKFL-------RPTSLPLKPGTF 1611
Fly 1612 TPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKM--------FYCTV-- 1666
Fly 1667 NCPQPSYVAGMHKLSMYSVWQV--CEENQPHPLGFKLKQVMALYDSRQRMLGNGSSTAMAGSGK- 1728
Fly 1729 -LSYNLVASQQIVSSPSTSSTSSAFYQGPLKT---PPTVTIAALSEANVAAKANEEAQAKKLETS 1789
Fly 1790 PSGQPLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFK 1854
Fly 1855 TKGNLTKHMQ-----------------SKTHFKKCIE------------------------LGIN 1878
Fly 1879 PGPMPPD---SEFLDVDMDFDQQSSTSAGGR---------TSSMAGESDSD-------------- 1917
Fly 1918 --------DYSDNESE------------------SSDTDESKSRQKEHEAARGLLSLSMTPPIPQ 1956
Fly 1957 S---VSPYPQLQD----TPLPAASPANSIGSSGSQPKRLVCSFTSPKPPFDYQKQEQYYSNPEES 2014
Fly 2015 KPKRS----------------VANEESAPMDL--------------------------------- 2030
Fly 2031 -----------TKPRGS--------ILLISPSPVSVPAHDLPKSQAQ------------------ 2058
Fly 2059 ---QMHDVI--------FG-------TSGNE-----SGFMKTLISVSDKVRISAEMEEQAKHEAE 2100
Fly 2101 GE--------------DVQLQTYIKEHALHQAKIKQSQFSRSYLINTLYTAASPVMSSSSTLFTA 2151
Fly 2152 NSRPVMSVNEVPSIEVHEVKTPEAIESPRSAPEQAPVILAQIAQEENEEPNIAEPH-NANLPAAV 2215
Fly 2216 QQPDVNEFTGVLGNPTAPPTSSVTATSVSTTTAAPVAPSSTANSTQPAQRTVIVGEDGFKSSTP- 2279
Fly 2280 ----TSKSG-DLQ-HVSYGRGVPPAPIAGDARPTCTMCSKTFQRQHQLTLHMNIHYMERKFKCEP 2338
Fly 2339 CSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNP------------RPFECTDCKIAFRIH 2391
Fly 2392 GHLAKH-----------------LRSKTHVQK--LEC-LQKLPFGTYAEIER-----AGISLTEI 2431
Fly 2432 D------------------------TSDCENSLISLKLLAQKLQEKDPGKLSSYTTPSGMMQLAQ 2472
Fly 2473 DAAGPVSQ--DSASEDGFSAAIASAIASLDNDSAGNTPKRASSMSEDETVAN 2522 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
shn | NP_001260883.1 | C2H2 Zn finger | 486..506 | CDD:275368 | |
zf-H2C2_2 | 499..523 | CDD:290200 | |||
C2H2 Zn finger | 514..536 | CDD:275368 | |||
zf-C2H2 | 1816..1838 | CDD:278523 | 6/21 (29%) | ||
C2H2 Zn finger | 1818..1838 | CDD:275370 | 6/19 (32%) | ||
zf-H2C2_2 | 1830..1855 | CDD:290200 | 9/24 (38%) | ||
zf-C2H2 | 1844..1868 | CDD:278523 | 9/40 (23%) | ||
C2H2 Zn finger | 1846..1868 | CDD:275370 | 9/38 (24%) | ||
zf-C2H2 | 2307..2328 | CDD:278523 | 6/20 (30%) | ||
C2H2 Zn finger | 2308..2328 | CDD:275368 | 6/19 (32%) | ||
zf-C2H2_jaz | 2333..2359 | CDD:288983 | 6/25 (24%) | ||
C2H2 Zn finger | 2336..2358 | CDD:275368 | 6/21 (29%) | ||
C2H2 Zn finger | 2381..2403 | CDD:275368 | 7/38 (18%) | ||
Zfat | XP_006241775.1 | C2H2 Zn finger | 272..292 | CDD:275368 | 6/19 (32%) |
zf-H2C2_2 | 284..306 | CDD:290200 | 9/21 (43%) | ||
C2H2 Zn finger | 300..320 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 327..348 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 355..395 | CDD:275368 | 6/44 (14%) | ||
C2H2 Zn finger | 405..425 | CDD:275368 | 3/19 (16%) | ||
C2H2 Zn finger | 433..453 | CDD:275368 | 2/19 (11%) | ||
C2H2 Zn finger | 459..477 | CDD:275368 | 3/17 (18%) | ||
C2H2 Zn finger | 737..757 | CDD:275368 | 1/19 (5%) | ||
C2H2 Zn finger | 765..815 | CDD:275368 | 7/54 (13%) | ||
C2H2 Zn finger | 825..844 | CDD:275368 | 3/27 (11%) | ||
C2H2 Zn finger | 875..896 | CDD:275368 | 7/20 (35%) | ||
C2H2 Zn finger | 904..924 | CDD:275368 | 6/19 (32%) | ||
zf-H2C2_2 | 916..941 | CDD:290200 | 9/24 (38%) | ||
C2H2 Zn finger | 932..952 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 961..981 | CDD:275368 | 1/19 (5%) | ||
C2H2 Zn finger | 989..1010 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 1036..1054 | CDD:275368 | 5/17 (29%) | ||
zf-C2H2 | 270..292 | CDD:278523 | 6/21 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |